Gene PG1595 details

Gene Information

• Locus tag: PG1595
• Symbol: rpe
• ID: 2552894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1673684
• End bp: 1674340
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637150225
• Product: ribulose-phosphate 3-epimerase
• Protein accession: NP_905725
• Protein GI: 34541246
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACCTA TCGTATCTCC ATCTTTGCTG TCGGCCGACT TCCTGCATCT GGCCGACGAT 
GTCGAAATGA TCAATCGCAG CGAGGCCGAC TGGCTGCATA TCGACGTCAT GGATGGCGTA 
TTCGTCCCCA ATCTTTCGTT CGGTTTTCCC ATTCTCGAGG CTATCCGACC GATTTGCAAG 
AAGCCGCTCG ATGTTCACCT GATGATCGTG GAGCCGATGA AGTTCGTGGA CAGGTTGGCC 
GAACTGGGCG TTTATATGAT GAACGTCCAC TATGAAGCCA GTCCGCACCT GCATCGCTCA 
CTGGCGGCGA TTCGCAAGGC CGGCATGAAA TCGGGCGTCA CGCTCAATCC GCATACTCCC 
GTGGAGGTGC TGACCGACGT GCTGGAAGAG GCCGATATGG TGCTTCTGAT GAGCGTAAAC 
CCGGGATTCG GAGGGCAGAA ATTCATCGAA AGGACGATAG ACAAGACGCA ACGCCTGCGC 
CGAATGATCG ATAGCCAAGG TCTGGATACG ATTGTTCAGA TCGACGGCGG TGTCAATGCC 
GCCACGGGAA AACGTCTGAT CGAAGCAGGA GCCGATTCGC TCGTAGCCGG CAGCTATGTG 
TTCGGAGCAG AGAAGCCGGA AGAAGCCATC AGTCTGCTGA AGAGTTATAG CCGTTAG 

 

Protein sequence

MQPIVSPSLL SADFLHLADD VEMINRSEAD WLHIDVMDGV FVPNLSFGFP ILEAIRPICK 
KPLDVHLMIV EPMKFVDRLA ELGVYMMNVH YEASPHLHRS LAAIRKAGMK SGVTLNPHTP 
VEVLTDVLEE ADMVLLMSVN PGFGGQKFIE RTIDKTQRLR RMIDSQGLDT IVQIDGGVNA 
ATGKRLIEAG ADSLVAGSYV FGAEKPEEAI SLLKSYSR