| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1403 |
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| Symbol | |
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| ID | 2551745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1486263 |
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| End bp | 1487129 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637150059 |
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| Product | rhomboid family protein |
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| Protein accession | NP_905562 |
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| Protein GI | 34541083 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.327287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTC GTTTGATGGT ATTCACGGTC TTGATCTCCT TGTTCGTTTG GCTTTTGCAT
GCCTTTCTGT CTCTTTTGGA TGCCGATCCG TATATCGTGG AGCGGTGGCT TTGGTTGGCC
CCCGATTTAT ATACCTTTTC GAGACATCCA TGGACGCTAT TCACGTACAT ATGGCTGCAC
TCGGATCTAT GGCATCTTTT CTTCAATATG CTGTGGCTCT ATTGGTTCGG ACAGCTTTTC
CTGCGCTATC AGAATCCCAG AAGGCTGGTC AGTGTCTATC TGCTTGGCGG ACTGGCCGGA
GGATTGCTCT ATGTATTGGC AGTCTTGTTC GCTGACGCCT TTTCATTGGG TTTGTCTCAT
TTCCCTCTGA TCGGAGCTTC TGCCAGCGTG ATGGCCATTG TCTTCGGAGT GGCTTTTTAT
GCTCGCTGGG AGCGAGTGAA TCTGTTATTC ATAGGTCGGA TCAAGCTGAC GACATTGGCT
CTCATCCTTT TTGTATTGGA TGTATTGCTA TTGACGGGGG ATAACTTCGG TGGTCACGTG
GCACATATCG GAGGAGCGGC TTTCGGAGTC TTGTTTGCCC TTTCATTGGC CCGAGGCAAG
GACATCACGG TTTGGTTTCA GCGACTGCTC GATCGCATGA CCGACTTTTT CAGCTCGCTC
TCCGGCCGAA GAAAAGTATG CTCGAAGCCT CGCTTTCGAG TAAGAAGAAC GACCAATCCG
GCTGCTAAAA AGAGTGGAAC GGATCCCAAA ATACGAGAAA CAAAGACTTC CATCGATGAG
ATCCTCGATA AAATTCGTAT ATCGGGATAT GCATCATTGA CTGCCGAAGA GAAGCGTCAT
CTCTTCGACC AAAGCAAGCG TTTATGA
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| Protein sequence | MNTRLMVFTV LISLFVWLLH AFLSLLDADP YIVERWLWLA PDLYTFSRHP WTLFTYIWLH
SDLWHLFFNM LWLYWFGQLF LRYQNPRRLV SVYLLGGLAG GLLYVLAVLF ADAFSLGLSH
FPLIGASASV MAIVFGVAFY ARWERVNLLF IGRIKLTTLA LILFVLDVLL LTGDNFGGHV
AHIGGAAFGV LFALSLARGK DITVWFQRLL DRMTDFFSSL SGRRKVCSKP RFRVRRTTNP
AAKKSGTDPK IRETKTSIDE ILDKIRISGY ASLTAEEKRH LFDQSKRL
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