| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1307 |
|---|
| Symbol | gidB |
|---|
| ID | 2551453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1387274 |
|---|
| End bp | 1387939 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637149977 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | NP_905481 |
|---|
| Protein GI | 34541002 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGA TACCCGAAAA GCCGCTGTCC CAACCGGCAG GTACCGAGAT CATCGAGAAA
TACTTCCCCC ACTTGTCCGA ACGGCAACGC GAACAATTCG AGCAAATGGG AGGGCTGTAC
ACGCATTGGA ATGCCCTCAT CAATGTCATT TCCCGAAAGG ATATAGACAA TTTGTATCTG
CACCATGTGT TGCATTCTTT GGGGATAGCT CGCATGCTGA ACTTCAAACC CGGCACAAGT
GTATTGGATT TGGGTACGGG TGGAGGTTTC CCCGGTATTC CACTGGCGAT TTTGTTCCCT
CAAGTCTCTT TCCTGCTGGT GGACAGCATC GGCAAAAAGG TGAAAGTGGC TTCGGCCGTA
GCTGAAGCAT TGGGGCTTGA CAATGTGCGC ACTATGCACT GTCGGGCAGA AAGCATAGGT
GAGAAATTCG ACTTCATAGT CAGCCGTGCA GTAATGAAGC TGAGCGAACT GGCCAAGATC
TGCAGGAAAC TCATCCGGCG TGAAGATCAG CAAAATGCGC TCCCGAACGG GCTTATCTGT
CTCAAGGGTG GCGAGCTTCA GCACGAGATA CTGCCATTCC GGAACAAGGC AATGACAGAG
GAGCTATGGC CGACCTTCGA AGAAGAGTAT TTCAAAACAA AAAAAGTGGT CTACTTACCT
CTATGA
|
|---|
| Protein sequence | MQEIPEKPLS QPAGTEIIEK YFPHLSERQR EQFEQMGGLY THWNALINVI SRKDIDNLYL
HHVLHSLGIA RMLNFKPGTS VLDLGTGGGF PGIPLAILFP QVSFLLVDSI GKKVKVASAV
AEALGLDNVR TMHCRAESIG EKFDFIVSRA VMKLSELAKI CRKLIRREDQ QNALPNGLIC
LKGGELQHEI LPFRNKAMTE ELWPTFEEEY FKTKKVVYLP L
|
|---|
| |