Gene PG1278 details

Gene Information

• Locus tag: PG1278
• Symbol: serC
• ID: 2553159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1355492
• End bp: 1356574
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637149955
• Product: phosphoserine aminotransferase
• Protein accession: NP_905459
• Protein GI: 34540980
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG1932] Phosphoserine aminotransferase
• TIGRFAM ID: [TIGR01364] phosphoserine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGAAGC ACAATTTCAC CGCAGGACCC TGTATCCTCA ATGACTTAGT TTTGAAAGAT 
GCTGCATCAG CATGTCTCAA TTTTGCAGGA ACGGGTCTTT CTGTTCTTGA AGTTTCTCAC 
CGCGACAAAG AGTTCGATGC TGTAATGCTC GAAGCTCGCA ATCTCTTCAA AGAACTTCTT 
GATGTGCCCG AAGGCTATGA AGTACTTTTC CTCGGTGGTG GCGCCAGCCT CCAATTCTAC 
CAAGTACCGC TGAACCTGCT AAAGAAGAAA GCAGCCTTTA TCAACACCGG TACATGGGCA 
ACCAACGCCA TCAAGCAGGC CAAGATCATG ACGCAGGTAT ATGGTGGAGA AGTAGAGGTT 
TTGGCTTCAT CTGAAGACAA GAACTTCTCA TACATCCCCA AGGATTTCGT TATTCCTGAG 
GACGTAGATT ATTTCCACTT CACGACAAAC AACACGATCT ACGGTACTGA AATTCGTAAG 
GACTTCGACA CGAAGACTCG CCTTGTAGCA GACATGTCTT CCGACATTTT CTCTCGTCCG 
ATAGACGTTT CCAAGTATGA CCTCATCTAC GGTGGTGCTC AGAAGAACAT CGGTCCGGCC 
GGAGCTACTT TCGTATTGGT AAAAACGGAT GTGCTCGGAC AAGTAGATCG TCCTCTACCC 
GATATGCTGA ACTATCAGAT CCACATCAAG AAAGACTCTA TGTTCAACAC TCCTCCCGTA 
TTCCCCGTTT ATGTAGCACT CCAGACGATG AAGTGGTACA AAGAACTCGG CGGTGTGAAG 
GTGTTGGAAA AGATGAATCT GGACAAGGCA GCCCTTATCT ACGATGCCAT CGACAGCAGC 
AAGATCTTCC GCGGCACGGT TAATCCTGAA GACCGCTCTA TCATGAACGC TTGCTTCGTG 
ATGAAGGATG AGTACAAAGA ACTGGAGAAA GAGTTCGCTA CGTTTGCAGC TTCACGCGGC 
ATGGTAGGTA TCAAGGGACA CCGCTCTGTA GGCGGTTTCC GCGCTTCTCT CTACAACGCA 
TTGCCTATCG AAAGCGTACA ATCTTTGGTT AGCGTAATGA AGGAATTCGA AGCTAAGCAC 
TAA 

 

Protein sequence

MKKHNFTAGP CILNDLVLKD AASACLNFAG TGLSVLEVSH RDKEFDAVML EARNLFKELL 
DVPEGYEVLF LGGGASLQFY QVPLNLLKKK AAFINTGTWA TNAIKQAKIM TQVYGGEVEV 
LASSEDKNFS YIPKDFVIPE DVDYFHFTTN NTIYGTEIRK DFDTKTRLVA DMSSDIFSRP 
IDVSKYDLIY GGAQKNIGPA GATFVLVKTD VLGQVDRPLP DMLNYQIHIK KDSMFNTPPV 
FPVYVALQTM KWYKELGGVK VLEKMNLDKA ALIYDAIDSS KIFRGTVNPE DRSIMNACFV 
MKDEYKELEK EFATFAASRG MVGIKGHRSV GGFRASLYNA LPIESVQSLV SVMKEFEAKH