Gene PG1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1242 
SymboldnaB 
ID2553187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1317575 
End bp1319161 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content54% 
IMG OID637149918 
Productreplicative DNA helicase 
Protein accessionNP_905428 
Protein GI34540949 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA CGAAGTCCCG CACCAAACGT CCTGCTCCGG AGAGCATCAC AGCTCCTTTG 
GAGGGACGTG TTCCGCCACA GGCTCCCGAA CTGGAGGAGG CTGTTTTGGG GGCTATCCTG
CTGGAAAAAG ATGCCTATAT GCAAGTGGGC GAAATGCTGC GTCCCAGTAC TTTCTACCTC
AAAACCCATG AACTGATCTA CGAGGCCATT ACGCAGCTGG CACTCAATCA GAAGCCCGTG
GATATGCTCA CGGTGACGGA GCAGCTCAAA AAGAACGGCA ATCTCGATGC GGTCGGCGGC
CCCTCTTATA TAGCCGGCCT GACGCTGAAA GTGGCAAGCT CAGCCAACTT GGAATTTCAT
GCCAAGATAT TGGCACAGAA AGCTTTGAGC CGTGAGGTAA TCGGCTTTTC CAGCGAAGTT
CTGAAGAAAG CTTACGACGA TACGGAGGAC ATCGAAGATC AGTTGCAGCA GGCCGAGGGA
CGATTGTTCG AGATCTCCCA ACACAACATG AAGCAGGACG TCCAGCCTAT CGACCCGATT
ATCAAAGAGG CCTTGGGCGA AATCCAGATT GCAGCCAACC GTAAGGAAGG ACTCAGCGGT
CAGCCATCCG GTTTCCCTGC CATCGACAAG CTCACGGCCG GTTGGCAGGC TTCCGATCTG
ATCATCATTG CTGCCCGTCC TGCTATGGGA AAGACCGCAT TCGTGCTTTC CATGGCCAAA
AATATGGCTA TCGACTATAA TATACCCGTA GCCATATTCA ATTTGGAAAT GAGCAGTGTA
CAGCTCGTCA AGCGTCTGAT GTCCAATGTC TGCGAGATTC CGGGTGAGAA GTTGAAGACC
GGTCGACTCG AATCACACGA ATGGGTACAG CTCGATACCA AGCTGAAAGA CTTCGAAAAC
AAACCCCTCT ACATAGACGA CACTCCTTCC CTTTCCGTCT TCGAACTGCG TACCAAATCG
CGCCGTCTGG TGCGCGAGTA CGGCGTGAAG GTGATCATCA TCGACTACCT TCAGCTCATG
AACGCGAGCG GAATGTCGTT CGGCAATCGT GAACAGGAAG TCAGTACCAT CTCACGCTCT
CTCAAGGTTT TAGCCAAGGA ACTGAAGATA CCCATCATCG CTCTCTCCCA GCTCAACCGA
AGTGTGGAGA CCCGTCAGGG CGACATCAAC AGCAAACGTC CGCAACTATC CGACTTGCGC
GAATCCGGAG CCATCGAACA GGATGCCGAT ATGGTATGCT TCATCCATCG CCCCGAATAC
TACAAGATCA CGGAAGACCA GCAGGGCAAC TCCCTTTTGG GCATAGGCGA ATTTATCATC
GCCAAGCATC GTAATGGTCC TGTGGATGAT GTACGTTTGC GCTTCCGCAG CGAGTTTGCC
AAGTTCCTAC CTCTTGAGGC CGAGAGCATG GTCAAACGCC ATTCCCGTAT CGGAGGCTCA
CCCGTGGAAA TGGGTGTCGG CAACGGATCG TTCGCCCCTC CCCTACCTCC ACCGGAGGAC
AATCCCCTCC TTTCAGGCCC CTATTCTTCC GGCACATCCG AGGCCGATTT CCTCGCCGAA
GCATCGGGAA TCGACAACCC TTTCTGA
 
Protein sequence
MATTKSRTKR PAPESITAPL EGRVPPQAPE LEEAVLGAIL LEKDAYMQVG EMLRPSTFYL 
KTHELIYEAI TQLALNQKPV DMLTVTEQLK KNGNLDAVGG PSYIAGLTLK VASSANLEFH
AKILAQKALS REVIGFSSEV LKKAYDDTED IEDQLQQAEG RLFEISQHNM KQDVQPIDPI
IKEALGEIQI AANRKEGLSG QPSGFPAIDK LTAGWQASDL IIIAARPAMG KTAFVLSMAK
NMAIDYNIPV AIFNLEMSSV QLVKRLMSNV CEIPGEKLKT GRLESHEWVQ LDTKLKDFEN
KPLYIDDTPS LSVFELRTKS RRLVREYGVK VIIIDYLQLM NASGMSFGNR EQEVSTISRS
LKVLAKELKI PIIALSQLNR SVETRQGDIN SKRPQLSDLR ESGAIEQDAD MVCFIHRPEY
YKITEDQQGN SLLGIGEFII AKHRNGPVDD VRLRFRSEFA KFLPLEAESM VKRHSRIGGS
PVEMGVGNGS FAPPLPPPED NPLLSGPYSS GTSEADFLAE ASGIDNPF