| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1117 |
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| Symbol | |
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| ID | 2553316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1190150 |
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| End bp | 1191601 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637149816 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_905328 |
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| Protein GI | 34540849 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.860788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC CGAATTTTGA CACGGCCTCC CTCCTGCCGA TACTTTCAAG AATCGCTTCG
TATCCTTTCC CGTTAGGAGG TAAAGGCGTA CTTTCGCAGC ACGCTATGGA TGCTACAACG
CAAAAGACCG GCCACTACGG GGCATTGCTC CGCCTCGGGC TACCCATTAT CATCGGCCAA
CTGGGAATCA TCTTCGTCAG CTTTGCCGAT AATATCATGG TCGGGCAGCA CTCCACAGCA
GAGTTGGCCG CAGCCTCCTT TGTGAACAAC ATATTAGGCC TGCTCCTCAT CCTCGGTATC
GGCTTTGCAT ACGGGCTGAC GCCGCTGGTG GCATCGGCCG AACACAGAGG GCAGTACTTC
AAAGCCGGCA TCCTGCTCCG GCACAGCCTC CGCCTCAATA TAGCGATCGG ACTCTTCCTC
GCAGGTGTGG CAGCCGTGAT GGTTCCCCTG TTCGATACAT TCAACCTCCC ACCCTCGCTC
CGCCCTCTCG CCATCCCCTA TTATTGGGTA CAGGTGGGAG GCCTCTTCCT CGTCACGGTA
TTCAATGCCT TCAAGCAATT CTATGACGGC ATGAGCGATA CGCGCACCCC GATGTATATT
ACCATATCGG GCAATCTCTT CAATGTCGGG CTGAACTACC TGCTGATATT CGGCAAAGGC
GGTCTCCCCG AAATGGGACT CCTCGGTGCG GGCTATGCCA CCCTGTTGAG CCGCCTGCTG
ATGCTCGTCA CCATCGTCCT TTTCCTCTAT CGCAGACCCT CATGGACAGC GATCCGCCAC
GCCTTCTGCC GGCAGATGCA TATCCGTCGC GCCTACCGCC GCCTATTCTC CGTCGGACTC
CCCGTTGCCG TCCAGATGGG ACTCGAATCG GCCTCTTTCA CCATCGCCGT CCTTTTTGTC
GGGCGACTCG GCGATCAGGC TCTGGCAGCA CACCAGATCG TCTGCGTCAT CACCACGCTC
GGCTACCTCG TCTATTACGG GCTTGGTGCT GCCACCACCA TCCGCATCAG TCACTTCAAG
CTGCACGGCA AACCCGACGA AGTCCGCCGC GTAGCCGCCA CTGCCTACCG AATGGCCGCT
TTGACTGCCT GCGTTGTGGT TGTACTGCTT TTGCTCACAC GGCACAGCTT TTCCTTCCTC
TTCACGCCCG ACGAAGAGGT GGCGCACATC GTTGCCCTTA CGTTGATCCC CGTTGTCGTC
TACCAATTCG GAGATGCCCT CCAAGCCATC TATTCCAATG CTCTGCGAGG AATGGAGCGC
GTTCGTTTTC TGGCTCCGGC AGCAGCTTTC TGCCACGTAT TGCTGGCACC GATACTCTCC
TATTTGCTGG GATTCGTATT CATATTGGGC AATACGCCCA TGCAGTTGGC CGGTATCTGG
TCGGCCTTTC CCATCAGCCT GACACTGCTC GGCATCCTCT TCTACAGCTA CTTCCGGAAG
GTAACCCGAT AA
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| Protein sequence | MPKPNFDTAS LLPILSRIAS YPFPLGGKGV LSQHAMDATT QKTGHYGALL RLGLPIIIGQ
LGIIFVSFAD NIMVGQHSTA ELAAASFVNN ILGLLLILGI GFAYGLTPLV ASAEHRGQYF
KAGILLRHSL RLNIAIGLFL AGVAAVMVPL FDTFNLPPSL RPLAIPYYWV QVGGLFLVTV
FNAFKQFYDG MSDTRTPMYI TISGNLFNVG LNYLLIFGKG GLPEMGLLGA GYATLLSRLL
MLVTIVLFLY RRPSWTAIRH AFCRQMHIRR AYRRLFSVGL PVAVQMGLES ASFTIAVLFV
GRLGDQALAA HQIVCVITTL GYLVYYGLGA ATTIRISHFK LHGKPDEVRR VAATAYRMAA
LTACVVVVLL LLTRHSFSFL FTPDEEVAHI VALTLIPVVV YQFGDALQAI YSNALRGMER
VRFLAPAAAF CHVLLAPILS YLLGFVFILG NTPMQLAGIW SAFPISLTLL GILFYSYFRK
VTR
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