| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1113 |
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| Symbol | |
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| ID | 2553320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1185613 |
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| End bp | 1186836 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637149812 |
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| Product | integrase |
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| Protein accession | NP_905324 |
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| Protein GI | 34540845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAA GCACATTCAA GGTGCTGTTC TATGTGAATG GCAGCAAGGA GAAAGAAGGT
ATCGTCCCCA TCATGGGACG GGTTACAATC AACGGCACGG TGGCTCAGTT CAGTTGCAAG
CGCACCATCC CAAAGGAGTT GTGGGATGTG AAAGGCAACA GGGCGAAAGG CAAGAGCAGG
GAAGCCATCG CCACCAACCT CTCGCTCGAC AACATCAAGG CGCAAATCAT CAAGCACTAT
CAGCGTCTTT CCGACCGCGA GGCGTTCGTC ACGGCGGAGA TGGTGCGCAA TGCCTATCAG
GGGCTGGGCA GTGAGTACGA TACCCTGCTG AAAGCGTTCG ACAGGGATTG CGCCTCTCTG
CTCAAGCGTG TGGGCAAGGA CAGGAGCATG GGAACATACA AGGTGATGCT CAGGGCGAGG
AACAACACGG CGAGGTTTAT CCGCCACAAG TACAACCGCA GCGACATGTC GATGCTGGAA
CTCACCCCCG ACTTCATCAG GGACTTCGCC GTGTACCTCA GCACGGTGAA AGGAAACAGG
AACGCCACGA TATGGATAAA CTGCATGTGG CTCAAAGGCG TGGTGATGCG TGCGCACTTC
AACGGCAAGA TACCGAGAAA CCCGTTCGCT CAGTTCCATG TCAGCCCGAA CACGAAGGAG
CGTGCGTTCC TCACGGAGGA CGAGTTGAAG ACACTGATGT CGCATGAGTT CAAGGACAGC
CATTCCGCCT TCGTGCGTGA TTTGTTTGTC TTCGCCTCCT TCACCGCCCT TTCCTTCGTG
GACTTGAAGG AACTCACCAT CGACGAGATT GTGGAGGTGA ACGGTGAGAA GTGGATACTT
GCGAAAAGGC ACAAGACACA GGTGCCGTAC CAAGTGAAAC TGCTCGATGT ACCCTTGCAA
ATCATCGACA GATACCGACC GTTCCAAAAG GACAACTCCA TATTCGGGGA CATCAACTAC
TGGACGGTCT GCAAGAAGCT CAAAAAAGTC ATCAGCGAGT GCGGAATAAC AAAAGACATC
TCCTTCCATT GCGCAAGGCA CGGCTTTGCG ACATTGGCAC TCAGTAAGGG CATGCCGATT
GAGAGCGTGA GCCGTGTACT CGGACACACG AACATCGTAA CCACGCAACT CTATGCGAAG
ATAACCACCG AGAAACTCGA CACCGACCTC TCCATGCTCG GCAGCAAGCT CAACGCCTCA
TTTGGCTATA TCAAAATGGC ATGA
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| Protein sequence | MARSTFKVLF YVNGSKEKEG IVPIMGRVTI NGTVAQFSCK RTIPKELWDV KGNRAKGKSR
EAIATNLSLD NIKAQIIKHY QRLSDREAFV TAEMVRNAYQ GLGSEYDTLL KAFDRDCASL
LKRVGKDRSM GTYKVMLRAR NNTARFIRHK YNRSDMSMLE LTPDFIRDFA VYLSTVKGNR
NATIWINCMW LKGVVMRAHF NGKIPRNPFA QFHVSPNTKE RAFLTEDELK TLMSHEFKDS
HSAFVRDLFV FASFTALSFV DLKELTIDEI VEVNGEKWIL AKRHKTQVPY QVKLLDVPLQ
IIDRYRPFQK DNSIFGDINY WTVCKKLKKV ISECGITKDI SFHCARHGFA TLALSKGMPI
ESVSRVLGHT NIVTTQLYAK ITTEKLDTDL SMLGSKLNAS FGYIKMA
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