Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1006 |
Symbol | |
ID | 2553038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1063884 |
End bp | 1066568 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637149714 |
Product | hypothetical protein |
Protein accession | NP_905229 |
Protein GI | 34540750 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGAGT CGCCGCCAAT GGGGGCGGAG CGGAAGACTC CCTCTCTCCT ACCCCTTCTT TTCGAGCATT CTGATAAAGG AAAGGGGTTC GACTACAGAC TATTCACAAG CAATAAACTT AAAGTGTTTG CCACAGGTAA CAGCCGATAC ATACACAATA AACCAACAAT CATCCAAGCA ATGAAACGAA TCGTTTTATC ATCTTTCCTG TTCGTTCTGT CCATACTTTC TTTGATGGCA CAGAACAATA CCCTCGATGT ACACATATCC GGTACGATCA AGGATGCCTC CTCCGGCGAA CCAGTGCCCT ATGCCACTGT AAGCATCCGG CTGACAGGAG CAGATACCAC ACAGGTGTTC CGACAAGTGA CTGACGGCAA CGGCTACTTC GTCATAGGCC TGCCGGCAGC TCCCTCCTAT CACCTGACAG CTTCGTTCGT AGGTATGAAA ACCCATACCA TGCAGATTAG TCGGGGAAAT GGACAGCACG ACATCAAATC CATCGACATT TCTCTCGAAT CCGAGGACAA ACAACTCTCC ACCGTCACCG TATCGGCAGC ACGACCACTG GTGAAGATGG AGATAGACCG CCTGTCCTAT AATATGAAAG ATGACCCCGC AGCCAAGACG AACAACCTGC TCGAAATGCT GCGCAACGTT CCTTTGGTAA CGGTGGATGG TCAGGGCAAT ATCCAGGTGA AAGGATCTTC CAACTTCAAA ATCCACCTCA ATGGCAGGCC CTCGACCATG GTGAGCAGCA ACCCGAAGGA GGTCTTTCGC TCCATTCCTG CCCATACGAT CAAACGGGTG GAGGTCATCA CCGATCCGGG TGTAAAGTAC GATGCGGAAG GCACAAGTGC CATCCTGGAC ATCGTCACGG AAGAAGGTAA GAAGCTGGAA GGATATTCAG GTTCCATCAC GGCCAGTGTC AGCAACAATC CCACAGCCAA CGGTAGTATC TTTCTGACGG CAAAGTCCGG CAAAGTCGGG CTGACTACCA ACTATAACTA CTACGGTGGC AAAAACAAGG GCTCTCGCTA CTTTACCGAA CGTACTACAT CCATGCTCCA AACGATAGAA GAAGGCAAAG GGCAAGAAAC CTTTGGCGGA CACTTCGGCA ATGCCCTCCT CTCATTCGAG ATAGATTCGC TCAATCTCTT TACGGTGGGC GGCAATGTAC GCCTTTGGGA GATGACCACC GACCGGAACA GCGTAGAAAA AAGCTTTGCC GGCAGCAACC TCATGTCCTA CATAGACAGA AAACTCAAAA CACAGATGGA TGCCGGATCA TACGAGCTCA ATGCCGACTA TCAGCACAGC ACTCGCCTGC CGGGCGAATT GCTCACCGTT TCCTACCGCT TCACTCACAA TCCTAATAAT AGCGAGACCT TCATTGACCA ATGGAAGCGC GATCCGCTCA ACACAGCTAA TACGATCCAG TACGCCGGCC AGCACTCCAA ATCCGATGCG GGCATGGACG AACATACGGC ACAAGTGGAC TATACACGTC CCTTAGGACA AGCACATTCT TTGGAAGCAG GGCTGAAGTA CATCTATCGT CATGCCACGA GCGATCCTCT CTATGAGATA CGACCATCCG AAGATGCTCC GTGGCAGCCC GGCTCTCTAT ATGCACAGAA TCCGTCGAAC GGAAAGTTCC GCCACGATCA ATACATCGGA GCAGCCTATG CCGGCTACAA CTATCGTAAG GATCAGTATT CTTTGCAAAC CGGCCTCCGA GTGGAAAGCA GCAGGCTGAA AGCACTCTTT CCCGAAAACG CAGCAGCAGA TTTCTCCCAC AACTCGTTCG ACTGGGTGCC ACAGCTCACG CTCGGCTATA CCCCCTCGCC CATGAAGCAG CTTAAGCTGG CCTATAACTT CCGAATCCAA CGTCCTGCAA TCGGCCAACT GAATCCCTAC CGGCTACAGA CCAACGATTA TCAAGTACAG TATGGTAATC CCGACCTAAA GTCGGAGAAG CGTCACCACG TCGGTCTCTC CTATAATCAA TACGGAGCCA AGGTCATGCT TACAGCATCG CTCGACTACG ACTTCTGCAA CAACGCCATC CAGAATTACA CCTTCTCCGA CCCGGCCAAT CCCAATCTGT TCCACCAGAC CTATGGCAAT ATCGGACGAG AGCATTCTTT CAGCTTGAAT ACCTATGCCA TGTACACGCC GGCCGTATGG GTCAGGATTA TGCTCAACGG AAATATCGAT CGCACATTCC AAAAGAGCGA AGCACTCGGC ATTGATGTCA ATTCATGGTC CGGCATGGTA TACTCAGGCC TGATGTTCAC CCTGCCGAAG GATTGGACTG TGAATCTCTT CGGAGGTTAT TATCATGGGG GAAGAAGCTA CCAGACGAAG TATGATGGCA ATGTATTCAA CAATATCGGT ATAGCCAAAC AGCTTTTCGA CAAAAAATTG AGAGTCTCGC TGAGCGCAAA CAACATTCAT GCGAAGTATT CGACATGGAA GAGCCGGACC ATCGGCAATG GATTTACTAT TTATTCGGAA AATGCCGGTA TACAACGGAG TGTTTCCCTC AGCCTCACCT ACAGCTTCGG TAAGATGAAT ACACAAGTGC GCAAGGTAGA GCGTACGATC GTCAACGACG ACCTCAAGCA AACCTCATCC CAAGGACAGC AGGGTGGCGG ACAAGGAAAT CCTACCGGCA ATTGA
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Protein sequence | MRESPPMGAE RKTPSLLPLL FEHSDKGKGF DYRLFTSNKL KVFATGNSRY IHNKPTIIQA MKRIVLSSFL FVLSILSLMA QNNTLDVHIS GTIKDASSGE PVPYATVSIR LTGADTTQVF RQVTDGNGYF VIGLPAAPSY HLTASFVGMK THTMQISRGN GQHDIKSIDI SLESEDKQLS TVTVSAARPL VKMEIDRLSY NMKDDPAAKT NNLLEMLRNV PLVTVDGQGN IQVKGSSNFK IHLNGRPSTM VSSNPKEVFR SIPAHTIKRV EVITDPGVKY DAEGTSAILD IVTEEGKKLE GYSGSITASV SNNPTANGSI FLTAKSGKVG LTTNYNYYGG KNKGSRYFTE RTTSMLQTIE EGKGQETFGG HFGNALLSFE IDSLNLFTVG GNVRLWEMTT DRNSVEKSFA GSNLMSYIDR KLKTQMDAGS YELNADYQHS TRLPGELLTV SYRFTHNPNN SETFIDQWKR DPLNTANTIQ YAGQHSKSDA GMDEHTAQVD YTRPLGQAHS LEAGLKYIYR HATSDPLYEI RPSEDAPWQP GSLYAQNPSN GKFRHDQYIG AAYAGYNYRK DQYSLQTGLR VESSRLKALF PENAAADFSH NSFDWVPQLT LGYTPSPMKQ LKLAYNFRIQ RPAIGQLNPY RLQTNDYQVQ YGNPDLKSEK RHHVGLSYNQ YGAKVMLTAS LDYDFCNNAI QNYTFSDPAN PNLFHQTYGN IGREHSFSLN TYAMYTPAVW VRIMLNGNID RTFQKSEALG IDVNSWSGMV YSGLMFTLPK DWTVNLFGGY YHGGRSYQTK YDGNVFNNIG IAKQLFDKKL RVSLSANNIH AKYSTWKSRT IGNGFTIYSE NAGIQRSVSL SLTYSFGKMN TQVRKVERTI VNDDLKQTSS QGQQGGGQGN PTGN
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