| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0982 |
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| Symbol | |
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| ID | 2552092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1044450 |
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| End bp | 1046702 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637149693 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_905208 |
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| Protein GI | 34540729 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.682285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA ACAACGATCT AAAAGAAAAT GACAACAAAC TGTCAAATGT GCCTGAACCT
AATCGGCAAG AAGCTATTGC CTATTATAAC AGAGGCGTCG GCTGCTATAT TGTAGGATCG
TATGAAGAAG CGATTAAAGA CTATTCTAAG GCAATAGAAT TAGACGGTAA ATTCATCCCT
GCGTATTATA ATAGAGGAGT TGCATATTTT AAGAAAGGAT CGTATGAAGA AGCGATTAAA
GACTTTTCTA AGGCAATAGA ATTAGACGAT AAATTCGTCC ATGCGTATCA TGGTAGAGGA
AATGCATATT CTAAGAAAGG ATGGTATAAA AAAGCGATTA AAGACTATTC TCAGGCAATA
GAATTAGACG ATAAATACAT CCTTGGGTAT AATGGTAGAG GAGTTGCATA TTGTGAGAAA
GGATCGTATG AAGAAGCGAT TAAAGACTAT TCTAAGGCAA TAGAATTAGA CGATAAATAC
GCCCCTGCGT ATCATGGTAG AGGAAATGCA TATTCTAAGA AAGGATGGTA TAAAAAAGCG
ATTAAAGACT ATTCTCAGGC AATAGAATTA GACGGTAAAT TCGCCCATGC GTATTATGGT
AGAGGAAATG CATATTGTGA GAAAGGATCA TATGAAGAAG CGATTAAAGA CTATTCTCAG
GCAATAGAAT TAGACGATAA ATACGCCCCT GCGTATCATG GTAGAGGAAA TGCATATTCT
AAGAAAGGAT GGTATAAAAA AGCGATTAAA GACTATTCTC AGGCAATAGA ATTAGACGAT
AAATACATCC TTGGGTATAA TGGTAGAGGA GTTGCATATT ATGAGATAGG AGATTTTGAA
AAAAGTCAAG CGGACTTCAA TACAGTGCTA TATCTGATTC TCTCCAATGA ATTAATAAAT
CTTATAAGAC CTATAAGACC TGGACTATCC CGATTAATAA GGGCTTTTGA TGGCTATCCT
CACAACTGTC ACACTCTATT TCAGTACATA TCTCTACCGA CAGATTCTTT TTTCTCTCAA
GGCCCCACTT CTTTTATCTC CTATTGGCAA CGTGTTAGCC CTATACAAGA CTTCTTGCTT
TTACTACACT ACTATGAGCT GCAGTTACCG CACGAAGAGT TCGTAAGTTT TTATCCCATT
CTCATCTATA ATCTCGGAGG ATGTTCTGAG GCTTTCAAAG TTTTTGACGA AGAATTGGAT
ACAGGAGAAC AACCTCTTTC AGCCCAACAA TACTACTATT TTATTCTCTC TGCTCTAAGT
TTGAGTGAAG ATGCCAATCT TGGTCAAAAG AACATTATCA CAGATGCCAT AGACAAAGTA
TCGACTCAAA AAGAGCCGGC TCCTATAGAT TATTACTACT TAGGAATGAT ACACCTCTTG
AACAATGATA AAGAATCTGC AGTACAGGCC TTTCATTGCT CTTCTATTCC TTTTTCCCGA
ATAATGACAG ATAGCCTGAA CGAAACAACT CCCAGTCAAG AGTTAAGGCA TCTCTTGCAA
AACATACATT CAAAAGAGAT ACAGCCCATA GATATTGAGC AAGGAAATTT GTCCCAATTC
GAAGAATACC TTCATCTTTT GGAGGTTTGC TATTTCCCAG AGATGGCAAG AAAGTATTTG
GAGAAAGAAG TAAAAATGCT TTGGAATGCT TTTGAACTGA CAGAAGAAGC TCGTAAGGAG
TTGGCAGACA AAATACGTTT CCTCGAATGT AAAAGATTTG TAAGTCAACT GAAAACAGTA
AGCCTGTCGC AAGAAGAGTT TCAACGAGTC GAAAGCACTA TCCTGTTTGA AACACAAAAC
TTATCTTCGA AAGAAGAAAT TGAGGCTAAA ATCGTGAGGT TAATCAGTTC TCATGGACAG
GATACCACTC ACCGGGAAAT AATTCTCAAG CTTATACAAT ACCACTCCTA TAATGGAGAT
ATTGGTGCAG AAGAAATGTT CTTCTTAATG CTTTGGTTCG ATCGAAAGAT TTCGAACAAA
AAGTCAAAGA ATATTTCTGC AACATCAATG GATATAATGA TAGCAATATT TTCTGGTTGC
ATAACACACT ATTTAGGCAA TAATAGCCTA TTTATTAGTT GCCTTGGGGC TGCTATTCCT
GTAATTGCAG GAAAATTCAT CGAGAATGAG ACTTCTTCCG AAGAAATGAG CTATGAAGAA
TTCAAAAAAC AGCTCTTTGA GTGCAGCGAG GTAGATGACC TCATCAAACT TATTAATAAA
TCGGGTTATT GCCGTCCGAT AAAAGTTGTT TGA
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| Protein sequence | MNKNNDLKEN DNKLSNVPEP NRQEAIAYYN RGVGCYIVGS YEEAIKDYSK AIELDGKFIP
AYYNRGVAYF KKGSYEEAIK DFSKAIELDD KFVHAYHGRG NAYSKKGWYK KAIKDYSQAI
ELDDKYILGY NGRGVAYCEK GSYEEAIKDY SKAIELDDKY APAYHGRGNA YSKKGWYKKA
IKDYSQAIEL DGKFAHAYYG RGNAYCEKGS YEEAIKDYSQ AIELDDKYAP AYHGRGNAYS
KKGWYKKAIK DYSQAIELDD KYILGYNGRG VAYYEIGDFE KSQADFNTVL YLILSNELIN
LIRPIRPGLS RLIRAFDGYP HNCHTLFQYI SLPTDSFFSQ GPTSFISYWQ RVSPIQDFLL
LLHYYELQLP HEEFVSFYPI LIYNLGGCSE AFKVFDEELD TGEQPLSAQQ YYYFILSALS
LSEDANLGQK NIITDAIDKV STQKEPAPID YYYLGMIHLL NNDKESAVQA FHCSSIPFSR
IMTDSLNETT PSQELRHLLQ NIHSKEIQPI DIEQGNLSQF EEYLHLLEVC YFPEMARKYL
EKEVKMLWNA FELTEEARKE LADKIRFLEC KRFVSQLKTV SLSQEEFQRV ESTILFETQN
LSSKEEIEAK IVRLISSHGQ DTTHREIILK LIQYHSYNGD IGAEEMFFLM LWFDRKISNK
KSKNISATSM DIMIAIFSGC ITHYLGNNSL FISCLGAAIP VIAGKFIENE TSSEEMSYEE
FKKQLFECSE VDDLIKLINK SGYCRPIKVV
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