| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0936 |
|---|
| Symbol | |
|---|
| ID | 2552950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 995240 |
|---|
| End bp | 996541 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637149654 |
|---|
| Product | xanthine/uracil permease family protein |
|---|
| Protein accession | NP_905171 |
|---|
| Protein GI | 34540692 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0512099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT GGCAATCCAT TCTCGGATTC AATCCCGAGA AGCACTCCGT CCGAACGGAG
TTTATTGCAG GGGTGACCAC TTTCCTGACC ATGAGTTACA TCTTGGCGGT CAACCCTGAT
ATTCTTGCTG CAGCAGGGAT GGACAAAGGA GCCGTATTCA CGGCCACGGC ACTTTCTTCG
GCCGTGGCTA CGCTGCTGAT TGCATTTTTG GCCAAGCTGC CCTTCGCTCA AGCTCCGAGC
ATGGGGATCA ACGCTTTCTT CGCCTTCACT CTGGTTCAAG GCATGGGCTA CTCTTGGCAG
ACTGCACTGG CTGCCGTCTT TGTGGAGGGG ATCGTCTTCA TCCTGCTGAC GGCATTCAAT
ATCCGTGAGA AGATCGTCGA TTGCATTCCT TACAATCTGC GCTATGCTAT CTCGGCCGGT
ATCGGCATGT TTATCGCTTT CATCGGACTG AAGAACGCCG GTATTATCGT ATCCCATCCG
GCTACATTGG TCGCTCTCGG GCCTTTCACT CCGATATTCT TGCTGGCCAT CCTCGGTATC
ATCCTCAGCG CGGCACTGGT CGTGCGCAAG GTGCGAGGGG CTTTGTTCTA CAGTATCGCC
ATTTGTACGA TCGTCGGCAT TCCGCTGGGA GTGACAGCCA TTCCCGAAGG ATTTGCCCCT
ATCTCCTCTC CGCAGAGCCT AAGTCCCACT TTCCTGCAAA TGGATTTCGC CCCTCTCCTT
TCGTTCGATA TGGCTATGAC GATATTCGCT CTCGTCTTCA TGGATATTTT CAATACGATC
GGCACACTGA TCGGAGCAGC TGCCAAGACT GAAATGATGG ACGAAAAAGG GAATGTCAAG
AATATCAAGC AGGCCATGAT GGCCGATGCC ATCGGTACAA GCCTCGGTGC CATACTGGGC
ACCTCCACGG TAACTACTTA TGTGGAGAGC GGATCGGGCA TTGCCGAAGG AGGACGAACG
GGTTTGACGG CATTGGTTAC GGGCAGCTTT TTCCTGTTGG CTCTTTTTCT GTCGCCCCTG
TTTCTCCTTG TCCCAGGTGC AGCTACGACA GGTGCTCTTG TAATGGTAGG GGTATTTATG
CTCGGATCCA TTTCGATGAT CGATTTGTCC GACCTGTCCG AGACTTTTCC CGTCTTCATC
ACACTGCTGA CAATGGTACT CACCTACTCT ATCGCAGAGG GAATGGCCTT GGGGATGTTG
GCATTCGTCT TTGTCAAACT CTTGTCCGGA CAATACCGCA GTATATCCCT GCCTCTTTAC
ATTCTGGCTG TTCTTTTCAT CCTGCGCTAT GCCTTTGCAT GA
|
|---|
| Protein sequence | MKTWQSILGF NPEKHSVRTE FIAGVTTFLT MSYILAVNPD ILAAAGMDKG AVFTATALSS
AVATLLIAFL AKLPFAQAPS MGINAFFAFT LVQGMGYSWQ TALAAVFVEG IVFILLTAFN
IREKIVDCIP YNLRYAISAG IGMFIAFIGL KNAGIIVSHP ATLVALGPFT PIFLLAILGI
ILSAALVVRK VRGALFYSIA ICTIVGIPLG VTAIPEGFAP ISSPQSLSPT FLQMDFAPLL
SFDMAMTIFA LVFMDIFNTI GTLIGAAAKT EMMDEKGNVK NIKQAMMADA IGTSLGAILG
TSTVTTYVES GSGIAEGGRT GLTALVTGSF FLLALFLSPL FLLVPGAATT GALVMVGVFM
LGSISMIDLS DLSETFPVFI TLLTMVLTYS IAEGMALGML AFVFVKLLSG QYRSISLPLY
ILAVLFILRY AFA
|
|---|
| |