Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0872 |
Symbol | |
ID | 2552899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 934936 |
End bp | 935295 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637149601 |
Product | mobilizable transposon, Xis protein |
Protein accession | NP_905120 |
Protein GI | 34540641 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0188058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAG AAATCACTTT TGATAAGCTA CCCGAAGCGG TAACGTATCT GACCGAACAG GTCTCCGCCA TTAAAGAAAT GGTATCAGCA TTGCACCCTC CTGTGCCTGA AGAAAAATCT CTCATAGGCA TAGACGAAGC GTGCGTAATT ATTCAGAAAG CTAAACCTAC CATCTATGCT TTGGTACGCA AGGGAATTGT CCCTGCATAT AAGCGTGGCA AGAAACTCTA CTTCTACAAA GAAGAGTTAC TACAATGGGT AGAGTCTGGA CGAAAGGGTG CAACTACAGC CATATCATCT GAGGAGCAAC TGGCCATGAT GCGTCAAGAG GTGCGTCGTA AACCGAAATC TATCAAGTAA
|
Protein sequence | MNKEITFDKL PEAVTYLTEQ VSAIKEMVSA LHPPVPEEKS LIGIDEACVI IQKAKPTIYA LVRKGIVPAY KRGKKLYFYK EELLQWVESG RKGATTAISS EEQLAMMRQE VRRKPKSIK
|
| |