| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0839 |
|---|
| Symbol | |
|---|
| ID | 2552856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 897353 |
|---|
| End bp | 898534 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637149571 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_905091 |
|---|
| Protein GI | 34540612 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.121236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGT ATATATTCAG AACATTTTCT TGCGGATCGG GAGATTGCAT ATTCCTTATT
CTTAAAAGTG GTGACTATAC ATTAAATCTA ATGATTGATT GTGGTAAGTA CACTGAGGAG
ATAGATGAGT ATGTTAGGAA TAGTTTGAAA AATAAGATTG ATTATCTGAT AGTGACGCAT
ATAGACAATG ATCATATCAA CGGGCTGATA AAAATGCTAA CTCAAAATCC AGACCTTATA
ATCGAACATA TCATATATAA CTGCTACCAA AGGGTTATTA ACAATGAGCA GCCATGGACG
GAGCAGATGA AAGCGAATGT GGATAGGCTA TATGATCAGT TGCCCATTGT GATTGATATG
CTAAGTCAAA ATGTCAATGA AGAAAAGGCG CTGACCCTGG CAGAATGTAT ATTGAGAAAA
GAAGAATGGA GGAGGGCTTG GCAAAGAGAA TATATTACAG ATGAGTCTCC TGCGATTCAA
CTTGCCAACA ATATGGGGAG GATTATTTTC CTTTCTCCTT CCCAAGTTGC GTTAGATAGA
CTAGATGTAA AATATCGAAA GCTATTTTGG CAACAACTGT ACAAACAAAA AACAGAAGAC
TATGATGGGG AGGAAACTAT CTATGAGGCT TTGATGAGAA TTGCACAACT AGAAGAAGGC
GAGGAGACAA AAGATGAGAA CGTAAATGAT GATACGATCA ATGAACAGAT ATTGAAGCGA
TATGCATCCC GCCCATTATC GAAAATGGAT GACAACAATA TCGCTTCTAT TGCCTTTATT
TGGGAGTATC AAGGACATCG GATTCTGCTT ATGGGAGATG CAGATCCGGA GCAGGTGAGC
AATGCGATAG AAAAAGTATA TAAAGATGAA ACAAAACCAG TCATCTTTGA TTTAATTAAA
GTTTCTCACC ATGGTAGTGC ACACAGTACT TCATGTGGGT TGATGGATGT GATTGATAGT
GAAAGATTCT TCTTTACAGG AGGAGGAAAA GAGAGGCCGA GCCTACAAAC GCTGGGGAGA
ATCATCATAA GGCCCTTGCC TAATGGGATA GCATATCGGG ATATCCGATA TAATCGTCCT
AATGAAATCT TAAATAAGCT GGCTAATCTT TCTGTAGATG AAAAGGGTAG CCTCCACATC
AGAGTGAATC ACAACGAAAA TGGCTATGAA GTTTCCTGCT GA
|
|---|
| Protein sequence | MMKYIFRTFS CGSGDCIFLI LKSGDYTLNL MIDCGKYTEE IDEYVRNSLK NKIDYLIVTH
IDNDHINGLI KMLTQNPDLI IEHIIYNCYQ RVINNEQPWT EQMKANVDRL YDQLPIVIDM
LSQNVNEEKA LTLAECILRK EEWRRAWQRE YITDESPAIQ LANNMGRIIF LSPSQVALDR
LDVKYRKLFW QQLYKQKTED YDGEETIYEA LMRIAQLEEG EETKDENVND DTINEQILKR
YASRPLSKMD DNNIASIAFI WEYQGHRILL MGDADPEQVS NAIEKVYKDE TKPVIFDLIK
VSHHGSAHST SCGLMDVIDS ERFFFTGGGK ERPSLQTLGR IIIRPLPNGI AYRDIRYNRP
NEILNKLANL SVDEKGSLHI RVNHNENGYE VSC
|
|---|
| |