| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0838 |
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| Symbol | |
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| ID | 2552853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 895617 |
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| End bp | 896915 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637149570 |
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| Product | integrase |
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| Protein accession | NP_905090 |
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| Protein GI | 34540611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.116388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA AGCGCAATAT CATCTTTGCT CTGGAGAGCC GTAAGAAGGA CGGTGTCCTG
ATCGTGGAGA ACGTCCCTAT CCGTATGCGA GTGAATTTTG CTTCCCAGCG AATAGAGTTC
ACTACGGGCT ATCGTATCGA TGTCGCTAAA TGGGATGCAG ACAAGCAACG AGTAAAGAAT
GGATGCACGA ACAAGCTGAA GCAATCAGCC TCGGAGATCA ACGCTGCACT CCTAGGGTAC
TATACCGAGC TGCAAGAGGT GTTCAAGCGT TTTGAAGTGG CCGAGGTCAT GCCAAGCCCC
GCCGATGTTA AGAGCGCCTT CAATGCCCGT CATAGGTCTG ATGACGTACA AACGGAGCAG
ACTTCCGATA AGCCTGATGC TTCGGCAGAG TTCTACAAGG CCTTTGATGA GTTTGTTCGG
GTCTGTGGTC GGCAGAATGA CTGGACGCAC GCCACCTATG AGAAGTTCGC TGCAGTGAAG
AATCATCTTA GATCTTTCCG AGCAGACCTT AGCTTCTCCT TCTTCAATGA GGTGGGACTG
ACGGAGTATG TGCGCTACCT TCGGGAGGTA CGCAAGATGC GCAATAGCAC GATCGGGAAG
CAACTCAGCT TCTTGAAGTG GTTCCTGCGT TGGAGTTTTG GTCAAGGGAT ACATAGTAAC
AATGCCTACG ACACTTTCAG ACCTAAGCTC AAGGATACGC AGAAGAAGAT CATCTTCTTG
ACTTGGGAGG AGCTGACGAA GCTCCGAGAG TTCGAGATCC CTCCAGCTAA GCAGTCACTT
GACCGTGTGC GGGATGTTTT CCTCTTCCAG TGCTTCACGG GACTAAGGTA TTCGGATGTC
TACAATCTCA GAAGAAGTGA TATCAAGGAG GATCATATCG AAGTCACTAC GATCAAGACT
TCTGACAGCC TGGTCATCGA GCTCAACAAG CACAGCAAAG CTATCTTGGA GAAGTACCAG
GATGTGGTAT TTGAGCACGA TAAGGCGCTC CCCGTGATCA CCAACCAGAA GATGAATGAG
TACCTCAAGG AGCTTGCCGA ACTTGCTGGT ATCAATGAAC CGATTCGCCA GACCTACTAC
AAGGGAAATG AGCGCATCGA TGAAGTGACT CCTAAGTATG CTCTGCTCGG TACGCATGCT
GGTCGTCGGA CCTTTATCTG TAATGCGCTT GCCCTTGGTA TTCCTCCGCA AGTCGTGATG
AAGTGGACGG GGCACAGCGA CTACAAGGCA ATGAAGCCCT ACATCGATAT TGCAGACGAC
ATCAAGGCGA ATGCCATGAG TAAGTTCAAC CAGCTATAG
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| Protein sequence | MNIKRNIIFA LESRKKDGVL IVENVPIRMR VNFASQRIEF TTGYRIDVAK WDADKQRVKN
GCTNKLKQSA SEINAALLGY YTELQEVFKR FEVAEVMPSP ADVKSAFNAR HRSDDVQTEQ
TSDKPDASAE FYKAFDEFVR VCGRQNDWTH ATYEKFAAVK NHLRSFRADL SFSFFNEVGL
TEYVRYLREV RKMRNSTIGK QLSFLKWFLR WSFGQGIHSN NAYDTFRPKL KDTQKKIIFL
TWEELTKLRE FEIPPAKQSL DRVRDVFLFQ CFTGLRYSDV YNLRRSDIKE DHIEVTTIKT
SDSLVIELNK HSKAILEKYQ DVVFEHDKAL PVITNQKMNE YLKELAELAG INEPIRQTYY
KGNERIDEVT PKYALLGTHA GRRTFICNAL ALGIPPQVVM KWTGHSDYKA MKPYIDIADD
IKANAMSKFN QL
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