| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0729 |
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| Symbol | ddl |
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| ID | 2552707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 779916 |
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| End bp | 780908 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637149476 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | NP_905000 |
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| Protein GI | 34540521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC CAATTGTGGC TGTCATTGCA GGCGGTTATT CGGGCGAACA TTCGGTTTCG
CTCAAAAGTG CTGCCGGCAT TCTGTCCTGG CTGGGAAGCG AGCCTTTCTC CACCTTTCTT
GTTCTGATCG AACGTGATCG CTGGTCGGTA AGAGTATCGG AGCAGAGAGA GGTTCCACTG
GATAAGAACG ATTTCAGCTT TGATCTCGAT GGCGAACGAA TACGGTTTGA CTATGCTTAT
ATCACCATAC ATGGAACTCC GGGAGAGAAC GGTCTGCTTC AGGGGTATCT CGACATGATC
GGCATCCCAT ACAATACGGG TGACACGCTC GTCGAATCCC TGACTTTCAA CAAATATGTG
TGCAATCGTT TTCTCTCCGG CTTCGGTATC CGCATTGCCG ATTCTATGCG ACTGACCGGG
CGAGATACTC AGCCCGATGT GGCGGATCTG ATAGCACGTA TGGGGCTTCC TCTTTTCGTG
AAACCCAATG TGGGAGGTTC CAGCATCGCG ACTACCAAGG TGGTGGAAGC TGCACAGCTC
CTTCCGGCAA TAGAACAAGC CTTCTCGGAA GGCGAAGAGG TAATGATAGA GCGTCTGATA
TGTGGTACCG AGGTTACCTG CGGGGCATTC CTCAGAAAAA AAGAAGTGGT CGCATTGCCT
GTTACAGAAG TTGTCGCACA TAATGAGTTT TTCGACTTCG ATGCCAAATA CAACGGAGCT
GTAGAGGAAA TCACACCGGC GAGAATCAGC GATGAAGCCA CTCGATTGAT ACAGACCATG
ACTGCGCGCA TATACGAGCT TCTCAACGCT CGGGGCATCA TACGTGTGGA CTATATCATC
GAAGCGGATG GTATTCCCAC GCTGCTGGAA GTGAACACGA CACCGGGCAT GACCCCTACG
AGCTTTATCC CCCAGCAGGT TCGAGCAGCC GGAATGGATA TGAAAGAGGT GCTTTGCACT
ATCATTCGGG ATGGACTGAA TGAGACCCAA TAG
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| Protein sequence | MKKPIVAVIA GGYSGEHSVS LKSAAGILSW LGSEPFSTFL VLIERDRWSV RVSEQREVPL
DKNDFSFDLD GERIRFDYAY ITIHGTPGEN GLLQGYLDMI GIPYNTGDTL VESLTFNKYV
CNRFLSGFGI RIADSMRLTG RDTQPDVADL IARMGLPLFV KPNVGGSSIA TTKVVEAAQL
LPAIEQAFSE GEEVMIERLI CGTEVTCGAF LRKKEVVALP VTEVVAHNEF FDFDAKYNGA
VEEITPARIS DEATRLIQTM TARIYELLNA RGIIRVDYII EADGIPTLLE VNTTPGMTPT
SFIPQQVRAA GMDMKEVLCT IIRDGLNETQ
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