Gene PG0488 details

Gene Information

• Locus tag: PG0488
• Symbol: ruvB
• ID: 2552278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 528309
• End bp: 529340
• Gene Length: 1032 bp
• Protein Length: 343 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637149253
• Product: Holliday junction DNA helicase RuvB
• Protein accession: NP_904783
• Protein GI: 34540304
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2255] Holliday junction resolvasome, helicase subunit
• TIGRFAM ID: [TIGR00635] Holliday junction DNA helicase, RuvB subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTGAAG AATTTGACAT TAGACAGGAG CGTTACCGCG GCAACGACGG CGAACGGGAA 
GTCGAAAACA AGCTACGCCC CCTGACGTTC GACAGCTTTA GCGGTCAGGA CAAGGTGGTG 
GAGAATCTGA GCATCTTCGT TGCTGCAGCT CGTTTGCGCG GCGAGGCCTT GGATCATACG 
CTGCTGCATG GCCCTCCGGG GCTGGGTAAG ACCACGTTGT CGAATATCAT AGCCAATGAG 
CTTGGCGTGG GGCTTAAGAT CACTTCCGGT CCCGTCCTCG ACAAGCCGGG TGATTTGGCC 
GGACTCCTCA GTTCGTTGGA ATCCAACGAT GTACTTTTCA TAGACGAAAT ACACCGGCTG 
AGCCCTGTAG TGGAAGAATA TCTCTACTCG GCCATGGAGG ACTACCGTAT AGATATAATG 
CTGGACAAGG GACCCAGCGC GCGCTCCATT CAGATCAATC TCTCCCCCTT CACCCTTGTG 
GGAGCTACTA CGCGCAGCGG TTTGCTGACG GCACCCCTTC GCGCCCGTTT CGGGATCAAT 
CTTCATCTGG AGTATTACGA TGTGCATACT ATTACCGGTA TCGTGGAGCG GAGTGCACGC 
ATTCTGGAGG TGTCCTGTTC GCACGATGCT GCCGTAGAGA TAGCGGGACG AAGCCGTGGT 
ACGCCTCGTA TAGCCAATGC CTTGCTGCGA CGTGTAAGGG ACTTTGCACA AGTCAAGGGA 
TCCGGTGCCA TTGACAAACC GATAGCCTGC TATGCTCTCG AAGCCCTGAA TATCGACCGC 
TACGGACTGG ACAATGTGGA TCACAAGCTC CTCGCCACCA TCATAGACAA GTTCGCCGGA 
GGCCCCGTCG GATTGAGCAC CATTGCCACG GCCTTGGGGG AAGACCCCGG TACGATAGAG 
GAGGTCTATG AGCCATTCCT GATCAAGGAG GGATTCCTCA AGCGGACACC TCGCGGAAGA 
GAAGTGACGG AGCTGGCTTA TACGCACTTG GGACGTAATC CCCGTCCGCA CCGGCCATCC 
CTCTTCGACT GA 

 

Protein sequence

MTEEFDIRQE RYRGNDGERE VENKLRPLTF DSFSGQDKVV ENLSIFVAAA RLRGEALDHT 
LLHGPPGLGK TTLSNIIANE LGVGLKITSG PVLDKPGDLA GLLSSLESND VLFIDEIHRL 
SPVVEEYLYS AMEDYRIDIM LDKGPSARSI QINLSPFTLV GATTRSGLLT APLRARFGIN 
LHLEYYDVHT ITGIVERSAR ILEVSCSHDA AVEIAGRSRG TPRIANALLR RVRDFAQVKG 
SGAIDKPIAC YALEALNIDR YGLDNVDHKL LATIIDKFAG GPVGLSTIAT ALGEDPGTIE 
EVYEPFLIKE GFLKRTPRGR EVTELAYTHL GRNPRPHRPS LFD