Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0309 |
Symbol | apbE |
ID | 2551699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 344100 |
End bp | 345113 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637149092 |
Product | thiamine biosynthesis lipoprotein ApbE |
Protein accession | NP_904625 |
Protein GI | 34540146 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.912952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT GGTCAGGTTT AGCGGCCGTT CCGGGGATGA TCATTCTCGG TGCGGCCTTT TTTTCTTGCC GGAAAGCACC TGCCTATACG GTATTGCAGG GGGAGATATT CCATACCTAT TATCATATCA AATATAAGGG AGAGGCAGAT CATTCGCAGC GAGTGGATAG CGTATTCAGA GCTTTCAATC ATTCCCTTAA TCCGTTCGAC AGTACCAGTA TCATTGCCGG AGTGAATCGG AATCTTCCGG TCAGGACTGA CAGTATGTTC CGCCGGGTAT TTCGTCGGGC GCAGGAGATT GCAGCCGTTT CCGGCGGCTC TTACGATATT ACTTGCTCTC CGCTGATCAA TGCTTGGGGT TTCGGTTTCG AACATAAAGA GGACGTGACT GCACAGTTGA TCGACAGCAT CAGGGCCTTT GTCGGTTACC GGAGGGTACG ATTGGATGGC GAGACGGTTG TTAAGGATGA TCCGCGCACT ACGCTGAACA CCTCTTCCAT CGCCAAAGGA TATGCTTCGG ATCTGGTGGG CGAAGCCTTG GCTGCTCATG GGATCGGGGA CTATATGGTA GAGATCGGTG GAGAGGTTGC TTTCAATGGC CTCAATCCTC AAGGCAAGCC TTGGCGCATA GGTGTAAGTA AACCGCAGGA TGACAGTCTG GGCTTGGCGA TGCAGGAGTT CGAACTCGTC GTAGAGCTTA GTGGGAAAGG GGGCTTGGCG ACATCGGGCA ACTACCGGAA TTTCTATGTT CGGGATGGGA AGAAGTATGC ACATACGATC GATCCGCTTA GCGGCTATCC TGTGCAGACG GATGTGCTGA GTGCCACAGT CATTGCTCCC GATTGTATGA CGGCTGATGC CTTGGCTACT ACTTTTATGG TGGTCGGTTC GGAGCGTGTG CCTGCTATTG CCGCCGAATT CCCCGGTGTG GACTATATGC TTATTTTGTC CGATGGAGAC GGTTCTTATA AGACTGTGAT GAACGAAGGC TTCCGGAAAC GAGTAGCCAA GTAA
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Protein sequence | MKRWSGLAAV PGMIILGAAF FSCRKAPAYT VLQGEIFHTY YHIKYKGEAD HSQRVDSVFR AFNHSLNPFD STSIIAGVNR NLPVRTDSMF RRVFRRAQEI AAVSGGSYDI TCSPLINAWG FGFEHKEDVT AQLIDSIRAF VGYRRVRLDG ETVVKDDPRT TLNTSSIAKG YASDLVGEAL AAHGIGDYMV EIGGEVAFNG LNPQGKPWRI GVSKPQDDSL GLAMQEFELV VELSGKGGLA TSGNYRNFYV RDGKKYAHTI DPLSGYPVQT DVLSATVIAP DCMTADALAT TFMVVGSERV PAIAAEFPGV DYMLILSDGD GSYKTVMNEG FRKRVAK
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