Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0272 |
Symbol | |
ID | 2551961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 304539 |
End bp | 305798 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637149060 |
Product | CBS domain-containing protein |
Protein accession | NP_904593 |
Protein GI | 34540114 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | [TIGR03520] gliding motility-associated protein GldE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTTTCA TTATCGACCT GCTTCTTCTT TGCTGTTCGG CTTTTATGTC CTCCTGTGAG GTGGCTTATT TTTCACTAAA GCCGATCGAT CTGCAGAACA TCCGCGAACG GAATCACTCT TCCGACATCG CGCTTTCCAA TTTATTAGAC AATTCGAATC AGCTATTAGC TACTATTCTG ATCGGGAATA ATGTGATTAA TGTAGCCATC GTTATCCTTT CCAATTATGC CATCGAGCAG ACATTCGTTT TCTCTTCTCC GATCATTGGA TTTCTGATCC AGACGATACT CCTGACCACT GTTCTTTTGC TGTTCGGAGA GATTCTGCCG AAAGTGTATG CGCGGAAGAA TCCGCTGCAA TACTCGCGCT TTTCTGCTGC AGCTATGTCC GTTATCTATA AGATATTGTC ACCGTTTTCA AAATTGCTGG TCAAAAGTAC CGGCATCGTT ACCAGAGGTA TCAGCAAGAA GAAATACGAT ATGTCCGTGG ATGAGCTCTC GAAAGCGGTA GCCCTCACCA CTACGGAGGG AGAGCCGGAG GAGAAAGAAA TGATTAACGA AATCATCAAA TTCTATAATA AGACAGCCTG CGAAATCATG GTTCCGCGTA TCGATATTGT GGATGTGGAT CTGAGCTGGC CATTTCGTAA GATGCTTGAC TTCGTTGTTT CGTCGGGTTA TTCCAGACTT CCCGTTTCAG AGGGGTCAGA AGACAATATC AAAGGGGTGA TTTACATCAA AGATCTAATC CCACACATGG ATAAAGGCGA TGAATTCGAC TGGCATCCTC TGATTCGTAA AGCATATTTT GTCCCCGAAA ACAAGCGCAT AGATGATTTG CTCGAGGAGT TCAGAGCCAA TAAGGTGCAT GTCTCCATCG TTGTGGATGA GTTCGGTGGC ACTTGCGGAC TGATCACAAT GGAGGACATA TTGGAAGAGA TCGTCGGCGA GATTACGGAC GAGTACGATG AGGAAGAACT CCCCTTTAAG GTTTTGGGGG ATGGCAGTTA TCTTTTCGAA GGAAAAACGT CTCTCTCCGA TGTTCGACAC TATCTTGACC TTCCGGAAAA TGCTTTCGGT GAATTGGGGG ACGAGGTAGA TACGCTAAGT GGGCTCTTCT TGGAAATCAA GCAGGAACTC CCCCATGTGG GCGATACAGC AGTGTACGAG CCATTCCGCT TTCAAGTGAC CCAAATGGAC AAGCGCCGAA TCATCGAAAT CAAGATTTTC CCTTTCGAGC GCACTTGGGA GGTCGAATAG
|
Protein sequence | MAFIIDLLLL CCSAFMSSCE VAYFSLKPID LQNIRERNHS SDIALSNLLD NSNQLLATIL IGNNVINVAI VILSNYAIEQ TFVFSSPIIG FLIQTILLTT VLLLFGEILP KVYARKNPLQ YSRFSAAAMS VIYKILSPFS KLLVKSTGIV TRGISKKKYD MSVDELSKAV ALTTTEGEPE EKEMINEIIK FYNKTACEIM VPRIDIVDVD LSWPFRKMLD FVVSSGYSRL PVSEGSEDNI KGVIYIKDLI PHMDKGDEFD WHPLIRKAYF VPENKRIDDL LEEFRANKVH VSIVVDEFGG TCGLITMEDI LEEIVGEITD EYDEEELPFK VLGDGSYLFE GKTSLSDVRH YLDLPENAFG ELGDEVDTLS GLFLEIKQEL PHVGDTAVYE PFRFQVTQMD KRRIIEIKIF PFERTWEVE
|
| |