Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0202 |
Symbol | |
ID | 2551380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 238857 |
End bp | 239603 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637149004 |
Product | uroporphyrinogen-III synthase HemD, putative |
Protein accession | NP_904537 |
Protein GI | 34540058 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAA AAGTAAAGAA GATACTCATT TCACAGCCAC AACCCGTAGC GGGTAGGTCG CCTTATTACG ATATTGCTCA GAAACATGGC TGTGAGGTCG TGTTTCGTCC TTTCATCCAA GTAGAGTCCG TCAGTGCGAG AGAATTTCGC AATCAGAAAG TGAATATTCT AGACCATTCG GCCATCATCT TCACTGCACG TACAGCTATC GACCATTTTT TCAGTTTGTG TGAAGAATTG AGAGTCACCG TACCTGAGAC GATGAAGTAC TTCTGCGTAA GTGAATCGGT AGCAGTGTAC CTGCAGAAGC ATATCGTCTA TCGCAAACGG AAGATTTTTT TCGGAGCGAC GGGCAAACTG GAAGATCTCC TGACGGTTAT CAGCAAACAT AACAAAGAAA CCTACTTCGT CCCCTTGGCA GAAGAGCATA AGCATGATTT GCTGGATATG CTTACGGCCA AAAAGGTAAG TTTCAGTCCG GCCATTATGT ATCGCACGGT CAGCAATGAT TTCGGACCGG ATGAGGCATT GGACCATGAT ATGATATTAT TTTTCAGCCC TTCGGGTATT ACGGCCTTGC TGAAAAACTT CCCCAAATTC GAGCAGGGTA AGACCAAGAT CGGGGCTTTC GGCCCCACGA CAGCCAAGGC CGTCGAAGAA GCAGGTCTGC GGCTCGATCT GTCTGCGCCG ACCGAGCAAT ATCCTTCTAT GGCTATGGCA TTAGAGGATT ACCTCAACGG GAAATGA
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Protein sequence | MAVKVKKILI SQPQPVAGRS PYYDIAQKHG CEVVFRPFIQ VESVSAREFR NQKVNILDHS AIIFTARTAI DHFFSLCEEL RVTVPETMKY FCVSESVAVY LQKHIVYRKR KIFFGATGKL EDLLTVISKH NKETYFVPLA EEHKHDLLDM LTAKKVSFSP AIMYRTVSND FGPDEALDHD MILFFSPSGI TALLKNFPKF EQGKTKIGAF GPTTAKAVEE AGLRLDLSAP TEQYPSMAMA LEDYLNGK
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