| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0192 |
|---|
| Symbol | ompH-1 |
|---|
| ID | 2551398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 229730 |
|---|
| End bp | 230254 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637148994 |
|---|
| Product | cationic outer membrane protein OmpH |
|---|
| Protein accession | NP_904527 |
|---|
| Protein GI | 34540048 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2825] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGCG ATATGAAACG GTTTTTGATT TTGATCGGCT TTGCACTGGC GGTAGCTTTC
TCCGGTTTTT CCCAAAAGTT CGCTTTGGTA GATATGGAAT ATATCCTCAG GAATATTCCT
GACTATGAGA TGATGAACGA ACAGCTGGAA CAGGTGTCCA AGAAATGGCA AAATGAAATC
GAAGCTCTCG AAAATGAAGC CCAATCTATG TATAAGAAGT ATCAGAGCGA TCTCGTATTC
TTGTCTGCTG CACAGAAGAA AACCCAAGAA GAGGCTATCG TAAAGAAAGA GCAGCAAGCA
TCCGAGCTCA AGCGGAAGTA TTTCGGCCCG GAGGGGGAGC TGTATAAGAA ACGCTCCGAT
CTGATGAAGC CTATTCAGGA TGAGATTTGG AATGCTATCA AAGAGATTGC CAAGCGTAAC
AACTATCAGA TGGTGCTTGA TAGAGGTACG TCCGGAATTA TCTTTGCCAG TCCGTCTATT
GACATTAGCG ACCTTGTACT GAGCAAGATG GGCTTTAGCA AGTAA
|
|---|
| Protein sequence | MNGDMKRFLI LIGFALAVAF SGFSQKFALV DMEYILRNIP DYEMMNEQLE QVSKKWQNEI
EALENEAQSM YKKYQSDLVF LSAAQKKTQE EAIVKKEQQA SELKRKYFGP EGELYKKRSD
LMKPIQDEIW NAIKEIAKRN NYQMVLDRGT SGIIFASPSI DISDLVLSKM GFSK
|
|---|
| |