| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0185 |
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| Symbol | ragA |
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| ID | 2551403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 218469 |
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| End bp | 221522 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637148988 |
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| Product | ragA protein |
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| Protein accession | NP_904521 |
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| Protein GI | 34540042 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.458513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TGACGCTATT CTTCCTTTGC TTGCTGACGA GCATTGGGTG GGCTATGGCC
CAGAATAGAA CCGTGAAGGG TACAGTTATC TCCTCCGAGG ATAATGAGCC CCTGATCGGC
GCGAATGTCG TGGTTGTCGG AAACACCACT ATCGGTGCTG CAACCGACTT GGATGGCAAC
TTCACGCTTA GCGTGCCTGC CAATGCCAAA ATGTTGAGAG TGTCCTATTC CGGTATGACT
ACCAAAGAGG TCGCCATCGC TAATGTGATG AAGATCGTAC TGGATCCGGA CTCTAAGGTT
CTGGAGCAGG TAGTTGTATT GGGTTACGGT ACGGGACAGA AACTCAGCAC TGTTTCCGGT
TCTGTGGCCA AAGTGTCCAG CGAAAAGCTC GCGGAAAAGC CCGTTGCCAA TATCATGGAT
GCCCTCCAAG GTCAGGTAGC CGGTATGCAG GTTATGACTA CATCCGGTGA CCCTACTGCC
GTCGCTTCTG TGGAGATCCA TGGTACAGGG TCGTTGGGGG CAAGCTCTGC ACCATTGTAT
ATCGTGGATG GTATGCAAAC TTCTTTGGAT GTTGTGGCTA CGATGAATCC GAATGATTTT
GAATCTATGT CCGTTTTGAA AGATGCTTCT GCAACATCTA TTTATGGAGC TCGTGCTGCA
AACGGAGTCG TTTTCATTCA AACGAAGAAA GGTAAAATGA GCGAGAGAGG TCGTATTACC
TTTAATGCCA GTTACGGGAT TTCTCAAATC CTGAATACTA AGCCCCTTGA TAATATGATG
ACTGGAGATG AATTGCTGGA TTTTCAGGTG AAGGCAGGTT TTTGGGGGAA CAATCAAACC
GTTCAGAAGG TTAAAGATAT GATCCTTGCC GGAGCTGAAG ATTTGTATGG CAATTATGAT
TCTTTGAAAG ATGAGTATGG TAAGACATTG TTCCCAGTGG ATTTTAATCA TGATGCAGAC
TGGCTCAAGG CTTTGTTTAA AACAGCACCC ACCAGTCAAG GTGATATTTC TTTCTCCGGA
GGGTCTCAGG GAACTTCATA TTATGCCTCT ATAGGCTACT TCGATCAGGA AGGTATGGCT
CGTGAACCGG CAAATTTTAA GCGCTATAGT GGCCGGCTCA ACTTCGAAAG TCGTATCAAT
GAATGGCTGA AAGTTGGTGC AAATTTGTCT GGTGCGATAG CGAATAGACG ATCTGCCGAC
TATTTTGGAA AGTATTATAT GGGGTCAGGT ACTTTCGGTG TGTTAACGAT GCCTCGTTAT
TATAACCCTT TTGATGTGAA TGGGGATTTA GCAGATGTCT ATTACATGTA TGGAGCTACC
AGACCTTCTA TGACAGAACC GTACTTCGCA AAAATGAGAC CGTTCAGTTC CGAATCACAT
CAGGCCAATG TAAATGGTTT CGCCCAGATT ACTCCGATCA AAGGCCTTAC TTTAAAGGCA
CAGGCTGGTG TTGATATTAC TAATACTCGC ACTTCTTCTA AGAGAATGCC CAATAATCCG
TATGATTCTA CTCCTCTTGG GGAAAGAAGA GAAAGAGCTT ATCGAGATGT TAGCAAGTCT
TTTACAAATA CGGCTGAATA TAAGTTTTCA ATTGATGAAA AACATGATCT TACAGCATTG
ATGGGGCATG AATATATTGA ATATGAAGGG GATGTTATTG GGGCATCTTC TAAAGGATTT
GAAAGTGATA AGTTGATGTT ACTGAGCCAG GGAAAAACCG GAAATAGTTT GTCTTTGCCT
GAACACAGAG TCGCTGAATA TGCCTATTTG TCTTTCTTTA GTCGTTTTAA TTACGGTTTT
GACAAATGGA TGTATATAGA TTTCTCTGTT CGTAATGACC AATCCTCTCG ATTCGGATCC
AATAATAGAA GCGCGTGGTT CTATTCTGTC GGTGGAATGT TTGACATATA TAATAAATTC
ATTCAAGAAA GTAATTGGCT CAGTGATCTT CGACTGAAAA TGAGTTATGG TACAACGGGT
AACTCGGAGA TTGGTAATTA CAACCACCAA GCACTCGTTA CTGTGAACAA TTATACTGAA
GATGCTATGG GGCTTAGCAT TTCTACAGCA GGCAATCCCG ACCTCTCGTG GGAAAAGCAG
TCTCAGTTCA ACTTCGGTTT GGCTGCAGGG GCTTTCAATA ATCGCTTATC TGCAGAGGTA
GATTTCTATG TCCGCACTAC GAATGATATG TTGATTGATG TCCCGATGCC TTATATCAGT
GGTTTCTTCT CACAGTATCA GAATGTAGGC TCTATGAAAA ATACGGGTGT AGACCTTTCT
CTTAAGGGGA CGATCTACCA AAATAAGGAC TGGAATGTAT ATGCTTCTGC GAATTTCAAC
TACAATAGAC AGGAAATAAC AAAGCTTTTC TTCGGTCTCA ATAAGTACAT GTTGCCTAAT
ACCGGTACTA TATGGGAAAT TGGGTACCCC AATTCGTTCT ATATGGCTGA ATATGCTGGA
ATCGACAAAA AAACCGGTAA GCAGTTGTGG TATGTTCCTG GTCAAGTCGA TGCGGATGGT
AATAAAGTTA CAACAAGCCA GTACTCAGCT GACTTGGAGA CACGAATTGA TAAGTCTGTT
ACTCCTCCTA TTACAGGTGG TTTCTCCTTA GGTGCTTCTT GGAAAGGACT TTCTTTAGAT
GCTGATTTTG CCTACATCGT TGGTAAATGG ATGATCAATA ATGACCGTTA CTTTACAGAG
AATGGAGGTG GATTGATGCA ATTAAATAAA GATAAAATGC TATTGAATGC CTGGACAGAG
GATAATAAAG AAACAGATGT TCCAAAATTG GGACAGTCTC CTCAGTTTGA TACGCATTTG
TTGGAGAATG CTTCTTTCCT GCGTTTGAAG AATCTCAAAC TCACCTATGT ACTCCCCAAT
AGTCTTTTTG CTGGGCAGAA TGTGATTGGT GGAGCTCGTG TCTATTTGAT GGCGCGCAAT
CTGTTAACTG TTACGAAGTA TAAAGGCTTT GACCCTGAAG CAGGGGGGAA TGTGGGAAAA
AATCAATATC CTAATTCTAA GCAGTACGTT GCGGGTATTC AGTTGTCTTT CTAA
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| Protein sequence | MKRMTLFFLC LLTSIGWAMA QNRTVKGTVI SSEDNEPLIG ANVVVVGNTT IGAATDLDGN
FTLSVPANAK MLRVSYSGMT TKEVAIANVM KIVLDPDSKV LEQVVVLGYG TGQKLSTVSG
SVAKVSSEKL AEKPVANIMD ALQGQVAGMQ VMTTSGDPTA VASVEIHGTG SLGASSAPLY
IVDGMQTSLD VVATMNPNDF ESMSVLKDAS ATSIYGARAA NGVVFIQTKK GKMSERGRIT
FNASYGISQI LNTKPLDNMM TGDELLDFQV KAGFWGNNQT VQKVKDMILA GAEDLYGNYD
SLKDEYGKTL FPVDFNHDAD WLKALFKTAP TSQGDISFSG GSQGTSYYAS IGYFDQEGMA
REPANFKRYS GRLNFESRIN EWLKVGANLS GAIANRRSAD YFGKYYMGSG TFGVLTMPRY
YNPFDVNGDL ADVYYMYGAT RPSMTEPYFA KMRPFSSESH QANVNGFAQI TPIKGLTLKA
QAGVDITNTR TSSKRMPNNP YDSTPLGERR ERAYRDVSKS FTNTAEYKFS IDEKHDLTAL
MGHEYIEYEG DVIGASSKGF ESDKLMLLSQ GKTGNSLSLP EHRVAEYAYL SFFSRFNYGF
DKWMYIDFSV RNDQSSRFGS NNRSAWFYSV GGMFDIYNKF IQESNWLSDL RLKMSYGTTG
NSEIGNYNHQ ALVTVNNYTE DAMGLSISTA GNPDLSWEKQ SQFNFGLAAG AFNNRLSAEV
DFYVRTTNDM LIDVPMPYIS GFFSQYQNVG SMKNTGVDLS LKGTIYQNKD WNVYASANFN
YNRQEITKLF FGLNKYMLPN TGTIWEIGYP NSFYMAEYAG IDKKTGKQLW YVPGQVDADG
NKVTTSQYSA DLETRIDKSV TPPITGGFSL GASWKGLSLD ADFAYIVGKW MINNDRYFTE
NGGGLMQLNK DKMLLNAWTE DNKETDVPKL GQSPQFDTHL LENASFLRLK NLKLTYVLPN
SLFAGQNVIG GARVYLMARN LLTVTKYKGF DPEAGGNVGK NQYPNSKQYV AGIQLSF
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