Gene PP_5408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5408 
Symbol 
ID1042011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6169103 
End bp6170284 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content49% 
IMG OID637148806 
Producthypothetical protein 
Protein accessionNP_747508 
Protein GI26992083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00712451 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTTGC GAATCCAACC TGATGAATCG CTCCGTTCTT ATGTTGAACG AAACCTTTAC 
CTACAATTCC GTAACTCTGA CTTAGATATT CTGAAGTCGG CGGAGCTCCG TTACTTCAGC
TGGAGCAACA GGCAGGTAAA GCTCGTAGGC AGTATCATGG GCTGGCATGG CTGTTACGGC
TTTAACAAGT TGGTGCATTT GCATACCGAC TACCCCTTTC GAAGTGTGTT TAAGCCAACA
AAGTTTTTAG CTTACTCTGG AGCAGAGTTT GTATATGGGC AATACTGTTT TGACTCCCTC
GCAGATACTC GAACCTACTG TCCATTGTGC GTGAATGAAG ATATTCAGTC GCTAGGTTAC
TCTTATTGGC GACGTCTTCA CCCACATGTA ACTGTGTGCG CGAAGCACAA CGTCGATTTG
CTCTCGTACT GCCAGTTCTG TGAGCAGCCA TTTTCTCGCG ATGGCCACTC TGTCCAGGTA
ATGTGGAGCG GATGTTGCGG GCGCAGCCTA GGCAGCGCAA GGCCTACGGC CAACAGGGAC
CCATTGGCAT TGCGGCTGGC ACAATTCTAC GGAAGGATCT GCCTCCTTGA GCACCACCTT
GCACTTGAAA CGGTTCTACG GGTGCTCGAA AGCAAACTAA AAAACATAGA CAATGAAATT
GTTGATCAAA GCTTTAGGGA AGCTATTGAT GAATTTATAG CTGACACTGA ATTGCGTAAG
GAACGTGGTT ATGGGTTTAT CCTCCACGAA GACCGGCAGT ATGGCCTGCT TGATTTAATA
GCGCTTATCT ACGAGGGGTT TGATGACTTC CTAGGCCATT ACTTAAGCCT AGAATCGGGT
TCAGCACTGA TTGACTCTTG TTGGAGCACT TATCAAATTC GCAGTGATTA CTTTGATCAC
TACATCGAAG AAGATTACCG CCATGGAGTT GCCTTATGGT CACTCCGCGA TTTTGACCAC
TACAAAGCAC ACTCACTCCG AGACCGCCGA CCAAGACTCT ATCGTTGCTG CAACGTAGCT
GATTCAAGAC GCGACTTGCG TTTCAGTCCC AGACTGGTAA AAGCATCACT CCCAGCGGTT
CCTCGACTGG GAGCCACTGG TTGGGCGCCA GTCACCACGA GCAGATCCCT GCTGGGGAAC
CGGTCATCTA TCGATGACAC CTGTGCGCGT CAGTTGCAGT AA
 
Protein sequence
MLLRIQPDES LRSYVERNLY LQFRNSDLDI LKSAELRYFS WSNRQVKLVG SIMGWHGCYG 
FNKLVHLHTD YPFRSVFKPT KFLAYSGAEF VYGQYCFDSL ADTRTYCPLC VNEDIQSLGY
SYWRRLHPHV TVCAKHNVDL LSYCQFCEQP FSRDGHSVQV MWSGCCGRSL GSARPTANRD
PLALRLAQFY GRICLLEHHL ALETVLRVLE SKLKNIDNEI VDQSFREAID EFIADTELRK
ERGYGFILHE DRQYGLLDLI ALIYEGFDDF LGHYLSLESG SALIDSCWST YQIRSDYFDH
YIEEDYRHGV ALWSLRDFDH YKAHSLRDRR PRLYRCCNVA DSRRDLRFSP RLVKASLPAV
PRLGATGWAP VTTSRSLLGN RSSIDDTCAR QLQ