Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5408 |
Symbol | |
ID | 1042011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6169103 |
End bp | 6170284 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637148806 |
Product | hypothetical protein |
Protein accession | NP_747508 |
Protein GI | 26992083 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00712451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTTGC GAATCCAACC TGATGAATCG CTCCGTTCTT ATGTTGAACG AAACCTTTAC CTACAATTCC GTAACTCTGA CTTAGATATT CTGAAGTCGG CGGAGCTCCG TTACTTCAGC TGGAGCAACA GGCAGGTAAA GCTCGTAGGC AGTATCATGG GCTGGCATGG CTGTTACGGC TTTAACAAGT TGGTGCATTT GCATACCGAC TACCCCTTTC GAAGTGTGTT TAAGCCAACA AAGTTTTTAG CTTACTCTGG AGCAGAGTTT GTATATGGGC AATACTGTTT TGACTCCCTC GCAGATACTC GAACCTACTG TCCATTGTGC GTGAATGAAG ATATTCAGTC GCTAGGTTAC TCTTATTGGC GACGTCTTCA CCCACATGTA ACTGTGTGCG CGAAGCACAA CGTCGATTTG CTCTCGTACT GCCAGTTCTG TGAGCAGCCA TTTTCTCGCG ATGGCCACTC TGTCCAGGTA ATGTGGAGCG GATGTTGCGG GCGCAGCCTA GGCAGCGCAA GGCCTACGGC CAACAGGGAC CCATTGGCAT TGCGGCTGGC ACAATTCTAC GGAAGGATCT GCCTCCTTGA GCACCACCTT GCACTTGAAA CGGTTCTACG GGTGCTCGAA AGCAAACTAA AAAACATAGA CAATGAAATT GTTGATCAAA GCTTTAGGGA AGCTATTGAT GAATTTATAG CTGACACTGA ATTGCGTAAG GAACGTGGTT ATGGGTTTAT CCTCCACGAA GACCGGCAGT ATGGCCTGCT TGATTTAATA GCGCTTATCT ACGAGGGGTT TGATGACTTC CTAGGCCATT ACTTAAGCCT AGAATCGGGT TCAGCACTGA TTGACTCTTG TTGGAGCACT TATCAAATTC GCAGTGATTA CTTTGATCAC TACATCGAAG AAGATTACCG CCATGGAGTT GCCTTATGGT CACTCCGCGA TTTTGACCAC TACAAAGCAC ACTCACTCCG AGACCGCCGA CCAAGACTCT ATCGTTGCTG CAACGTAGCT GATTCAAGAC GCGACTTGCG TTTCAGTCCC AGACTGGTAA AAGCATCACT CCCAGCGGTT CCTCGACTGG GAGCCACTGG TTGGGCGCCA GTCACCACGA GCAGATCCCT GCTGGGGAAC CGGTCATCTA TCGATGACAC CTGTGCGCGT CAGTTGCAGT AA
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Protein sequence | MLLRIQPDES LRSYVERNLY LQFRNSDLDI LKSAELRYFS WSNRQVKLVG SIMGWHGCYG FNKLVHLHTD YPFRSVFKPT KFLAYSGAEF VYGQYCFDSL ADTRTYCPLC VNEDIQSLGY SYWRRLHPHV TVCAKHNVDL LSYCQFCEQP FSRDGHSVQV MWSGCCGRSL GSARPTANRD PLALRLAQFY GRICLLEHHL ALETVLRVLE SKLKNIDNEI VDQSFREAID EFIADTELRK ERGYGFILHE DRQYGLLDLI ALIYEGFDDF LGHYLSLESG SALIDSCWST YQIRSDYFDH YIEEDYRHGV ALWSLRDFDH YKAHSLRDRR PRLYRCCNVA DSRRDLRFSP RLVKASLPAV PRLGATGWAP VTTSRSLLGN RSSIDDTCAR QLQ
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