| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5407 |
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| Symbol | |
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| ID | 1042048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6166911 |
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| End bp | 6168509 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637148805 |
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| Product | transposition protein, TnsD-related protein |
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| Protein accession | NP_747507 |
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| Protein GI | 26992082 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00865323 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCTCA AAGGCAAGCA AATACCTTTT TTCCACTGGC TCCCGGATGA ATGTCTTTAC
AGCATATGCA GCCGCCAGCA TATTCTTTGG GGCAATCAGT CACCTACAGA TACACTGAGT
TTGCTTTTTG GAAGCGGGTA TAAAAAATTT GCACACGACT TTCCAAGCAA CCTGAGTCTA
TTAATCGATT CTGCGAAGTC TATTTGGGGA ACGCCAGAGG AAGTGATATC TGAACACACC
ATTGCACCCA TTTTCTTTCC TTTCCAGTCT TCTGATCACA TTCAGGAACT CAAACAAGCA
TTTATGGGGC CCAACATTGG ATCTATGAAG TATAGGCTTG GACTTGTGAC TGGTCGCTTC
GGTGGCGCAC ACCCTCTAAA GGCGTGTGTT AAATGCATGG CAGTTGACCG ATCAGTTCTA
GGCGTCACAT ATTGGCACTT ATCTCACCAG CTTCCGGGTG TTACGACTTG TCCAGTGCAT
GGAGTTTTGC TCTCGGAGTC AATCGAGAAC AGGCAGTGGT CCAGGGGTTT TCAGTGGCTA
CTTCCCGATG AATCAGCCAT CAGCGTGACT GATCAATCGG CCATAGATCC CGCAACCTTC
GAAGCACTAC AGAACATATC TGAGTTAGCA GTGGATCTGT GGAAATCAGG CTCCTCCTGC
CGGTTTGATA CCACTACTGT CGCTCAAGTT TACAAGGAAG CCTTCAGTAG TTTTGGCCGC
TCCCGGAAGG CGCGCGATGC TGCTGCCGAC CGCTTTGCTG AGCTCTGTGC AATGCTCAAA
CAGCACCCGC CTTTCACCGC TTTACCAACC ACGCGCAAGT GTGCAATAGG GTTCATTTCC
CAAATGACCC GCAAGCCCCG TGGTTACTGC CATCCGTTGA AGCATCTGAG TCTGATTTGG
TGGCTATTCG GGAGCTTAGA ATCATTCGTT AAGGCCTATC AACATGCCGC GAACCAGCAG
CAACTTCCAG TGACTAGCCT CCCAGCGAGG CTAAACTTAA CTAACACTTT CTTTAAGCCT
ATTTCAGCCC AAGGAAGGAG AACTGGTGCC CCGAAACCCA AAAAACTATT TAATGACTTG
AAGGAGAAAA TCCTCCGCGA ACTGATGACT GGCGCCAGCA AAAAAGACGT CTGTGTTACC
TTTGAGATAT CTATGAGTAC GGTAAATCGG CTACTACGGC TTAACCCGAG TGTCGACGAA
AAATTAAATA AAAACTTTAA ACTCAAGAAA CTTGAGGAAC AGCGTACCTT GTGGCGCTGC
GCCGTGGACA AATCGCCCGC CGCCAGCGCG AATGTAATTA AGCGGTCGGT ACCCAGCGTC
TATGCATGGC TCTACAGAAA TGATCAGTCT TGGCTACTTT CGCAAACAGC CTCACTACCA
AGTGGCAGGG CCGGCAACCA TGTCGCAATT GACTGGGATG CCCGGGATGA AAATTTGTGT
TCCTTGATTA AGAAGGTACT GGTAACGTCG ACCACCGAAC CCAGAAAAAT CCGAAAACGT
GACTTGTACC AAATGGTACC TAGTCTTTTT TCTTCGCTTG AGCAGAAGTC GCACTATCCA
AAGTCGAGGC AGCTCGTCTC CGAAATATCA CAGCAGTAG
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| Protein sequence | MNLKGKQIPF FHWLPDECLY SICSRQHILW GNQSPTDTLS LLFGSGYKKF AHDFPSNLSL
LIDSAKSIWG TPEEVISEHT IAPIFFPFQS SDHIQELKQA FMGPNIGSMK YRLGLVTGRF
GGAHPLKACV KCMAVDRSVL GVTYWHLSHQ LPGVTTCPVH GVLLSESIEN RQWSRGFQWL
LPDESAISVT DQSAIDPATF EALQNISELA VDLWKSGSSC RFDTTTVAQV YKEAFSSFGR
SRKARDAAAD RFAELCAMLK QHPPFTALPT TRKCAIGFIS QMTRKPRGYC HPLKHLSLIW
WLFGSLESFV KAYQHAANQQ QLPVTSLPAR LNLTNTFFKP ISAQGRRTGA PKPKKLFNDL
KEKILRELMT GASKKDVCVT FEISMSTVNR LLRLNPSVDE KLNKNFKLKK LEEQRTLWRC
AVDKSPAASA NVIKRSVPSV YAWLYRNDQS WLLSQTASLP SGRAGNHVAI DWDARDENLC
SLIKKVLVTS TTEPRKIRKR DLYQMVPSLF SSLEQKSHYP KSRQLVSEIS QQ
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