| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5300 |
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| Symbol | |
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| ID | 1042183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6047517 |
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| End bp | 6048566 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148699 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_747401 |
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| Protein GI | 26991976 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.233752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGGAT ACGGCTGGCG CCTCACGGGC GACGATGGTT GCAGCTGTTG TTGTTTTCAC
TTTCCCATCG TGGGGACTGG TTACCCGACC GGGCGCATTG ATTCCGGGGG GCCGTTTCAC
TATAAAATGG CCCAGACGCA ACAGACATTG GCAATTTGGC AAGCAGAGCG TGCATCAATG
CAATATCAGA TAACCCACGC AGACCTCTCT CTGGTCCTGG CACTGGAACG TGGCCGCTCG
CTGGCCAAAG CCGCCGAACT GCTCAAAGTC GACGTTTCGA CCGTGTTCCG CTCGATCCGC
CGATTGGAGT CGGCGCTGGG CACCGCCTTG TTCGTCAAGA GCCGAAAGGG CTATCTGCCG
ACTGACACCG CCCAGGCCTT GGCCGAGCAG GCCGAACGTG CCGAGCAGGC GCTGGAAGCA
GCGCGCATTG CCATGACCAG TGGCGAGCAG GTGGTCAGCG GCACGGTGCG CCTTACCTGC
ACGGAGGCGG TGATGCACAG CCTGTTGCTG CCGGCACTGG CCGAGTTCAT GTCCAACTAC
CCGGCCTTGT CGCTGGAGAT GGGCACCTCC AACACCTTCG CCAACCTCAG CCGGCGCGAC
GCCGACATCG CCCTGCGCCT GACCAACACA CCTCCGGAGC ACCTGGTTGG CCGCAACCTG
GGTTCGACCT CCTATGTAGT CTGCGGCCAG CCACAGTGGC GCGAGCGCCT CAGCGAGTCC
CCCGCCAGCG TGCCGTGGAT CGCACCAGAC GACTCGATGC AGGACCACCC TACGGTGGTC
TGGCGCAACC AACAACACCC GGGCCTGAGC CCGCGCTACC AGTGCAGCAG CATGTCGACC
ATCGCCCAGT TGGTAATGGC CGGCCTGGGC GTGGCAGCAC TGCCGGACTA CATGGTGCAT
GCGCTGCCCG GGGTGGATGC ACTCAGCGGC CCCCTGCCCG GCTGCGACAC TCAGTTGTGG
TTGCTGACCC GGCCGGATTG CCGGGCGTTG CGCTCGGTGC AGACCTTGTT CGAAGAGCTG
ACCCCGCGGT TGCGTGACGC GATGCTCTGA
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| Protein sequence | MWGYGWRLTG DDGCSCCCFH FPIVGTGYPT GRIDSGGPFH YKMAQTQQTL AIWQAERASM
QYQITHADLS LVLALERGRS LAKAAELLKV DVSTVFRSIR RLESALGTAL FVKSRKGYLP
TDTAQALAEQ AERAEQALEA ARIAMTSGEQ VVSGTVRLTC TEAVMHSLLL PALAEFMSNY
PALSLEMGTS NTFANLSRRD ADIALRLTNT PPEHLVGRNL GSTSYVVCGQ PQWRERLSES
PASVPWIAPD DSMQDHPTVV WRNQQHPGLS PRYQCSSMST IAQLVMAGLG VAALPDYMVH
ALPGVDALSG PLPGCDTQLW LLTRPDCRAL RSVQTLFEEL TPRLRDAML
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