Gene PP_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5253 
Symbol 
ID1042331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5997222 
End bp5998040 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID637148652 
Productarylesterase, putative 
Protein accessionNP_747354 
Protein GI26991929 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT TCGTTACCCG CGATGGCACT TCGATCTATT TCAAGGACTG GGGCAGCGGC 
AAGCCCGTGC TGTTCAGCCA CGGCTGGCCG CTGGATGCCG ACATGTGGGA TTCGCAGATG
GAGTTCCTGG CCAGCCGCGG TTACCGCGCC ATCGCCTTCG ACCGCCGGGG TTTCGGCCGC
TCGAGCCAGC CGTGGAACGG TTACGACTAC GACACCTTCG CCGATGACAT TGCCCAGTTG
ATCGAGCACC TCGACCTGCG CGACGTCACC CTGGTGGGCT TCTCGATGGG GGGCGGTGAT
GTCAGCCGCT ATATCGCCCG CCACGGCAGC GAGCGGGTGG CCGGGCTGGT GTTGCTGGGC
GCGGTGACGC CAGTGTTCGG CAAGCGTGAC GATAACCCTG ACGGTGTCGA CCTGTCGGTG
TTCGAGGGCA TCCGGGCCGG CCTGCGTGCC GACCGCGCGC AGTTCATCGC CGATTTCGCC
ACGCCGTTCT ACGGCCTGAA CCATGGGCAG CAGGTGTCCC AGGGTGTGCA GACGCAGACC
CTGAACATTG CGCTGATGGC GTCCATCAAA GGCACCCTGG ATTGTGTGAC GGCCTTCTCG
GAGACCGATT TCCGTCCGGA CATGGCCAAG GTCGATGTGC CGACGTTGGT GATCCATGGC
GATGACGACC AGATTGTGCC GTTCGAGACC ACTGGCAAGC AGGCGGCGGA GCTGATTCGT
GGCGCCGAGC TGAAGGTGTA TGCCGGGGCG CCGCACGGTT TTGCAGTGAC TCATGCGCAG
CAGCTGAATG AGGACTTGCT GGCGTTCCTT CAGCGGTAA
 
Protein sequence
MSTFVTRDGT SIYFKDWGSG KPVLFSHGWP LDADMWDSQM EFLASRGYRA IAFDRRGFGR 
SSQPWNGYDY DTFADDIAQL IEHLDLRDVT LVGFSMGGGD VSRYIARHGS ERVAGLVLLG
AVTPVFGKRD DNPDGVDLSV FEGIRAGLRA DRAQFIADFA TPFYGLNHGQ QVSQGVQTQT
LNIALMASIK GTLDCVTAFS ETDFRPDMAK VDVPTLVIHG DDDQIVPFET TGKQAAELIR
GAELKVYAGA PHGFAVTHAQ QLNEDLLAFL QR