Gene PP_5196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5196 
Symbol 
ID1042469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5928038 
End bp5929039 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID637148595 
Productiron ABC transporter, periplasmic iron-binding protein, putative 
Protein accessionNP_747297 
Protein GI26991872 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCAC GCAAGCCCCT ACTGGCCGCC TTGGCCCTGA CCCTGTTCGG CGGCACTGCC 
CAGGCAGCGG ACGAAGTGGT GGTGTACTCC TCGCGCATCG ACGAGCTGAT CAAGCCGGTG
TTCGATGCCT ATACCGCCAA GACCGGGGTC AAGATCAAGT TCATCACCGA CAAGGAAGCC
CCGCTGATGC AGCGCATCAA GGCCGAGGGC GATAACGGCG TGGCCGACCT GCTGCTGACC
GTCGATGCAG GCAACCTGTG GCAGGCCGAG CAGATGGGCA TTCTGCAGCC GATCGAGTCC
GACGTCATCG ACCAGAACAT CCCGGCGCAG TACCGCGCCT CGTCCCATGA CTGGACCGGC
CTGAGCCTGC GCGCCCGCAC CATCATCTAC TCCACCGAGC GGGTCAAACC CGAGGAGTTG
AGCACCTACG AAGCCCTGGC TGACAAACAG TGGGAAGGCC GTCTGTGCCT GCGCACGGCC
AAGAAGGTGT ACAACCAGTC GCTGACCGCC ACCCTGATCG AAACCCACGG TGAGGCCAAG
ACCGAGCAAA TCGTCAAAGG GTGGGTCAAC AACCTGTCCA CCGATGTGTT CTCCGACGAC
AACGCGGTGA TCCAGGCCAT CGAGGCCGGG CAATGTGATG TGGGCGTGGT CAACACCTAC
TACTACGGCC GTCTGCACAA GCAGAACCCG AACCTGCCGG TGAAGATCTT CTGGCCCAAC
CAGGGTGACC GTGGCGTGCA CGTGAACCTG TCGGGCATCG GCCTGACCAA GCATGCGCCA
CACCCGGAAG CCGCGAAGAA ACTGGTGGAA TGGATGACCG GCGAAGAAGC GCAAAAGCTG
TTTGCTGATA TCAACCAGGA GTTCCCGGCC AACCCGAAGG TGAAACCATC GGAGGAAGTG
GCGGCGTGGG GCAGCTTCAA GGCCGACAGC ATTCCGGTGG AAATTGCCGG CAAGCGCCAG
GCTGAAGCCA TTCGCCTGAT GGATCGGGCT GGCTACAACT AA
 
Protein sequence
MLPRKPLLAA LALTLFGGTA QAADEVVVYS SRIDELIKPV FDAYTAKTGV KIKFITDKEA 
PLMQRIKAEG DNGVADLLLT VDAGNLWQAE QMGILQPIES DVIDQNIPAQ YRASSHDWTG
LSLRARTIIY STERVKPEEL STYEALADKQ WEGRLCLRTA KKVYNQSLTA TLIETHGEAK
TEQIVKGWVN NLSTDVFSDD NAVIQAIEAG QCDVGVVNTY YYGRLHKQNP NLPVKIFWPN
QGDRGVHVNL SGIGLTKHAP HPEAAKKLVE WMTGEEAQKL FADINQEFPA NPKVKPSEEV
AAWGSFKADS IPVEIAGKRQ AEAIRLMDRA GYN