| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5175 |
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| Symbol | |
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| ID | 1042541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5901939 |
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| End bp | 5903027 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148574 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | NP_747276 |
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| Protein GI | 26991851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.321705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGA TGCGTCCGCT GTCGGTTGTC TGCCTGGGGC TGTTGTACAT GCTCACCGGC
TGTAGCAAGG AAGAGGTCCC CGAGACACTG CCTCGGGTGG GTGTGCAGCA GGTACAACCC
ACCGATTTCG CTGCCAGGGT CACTTTGACC GGCGACGTGC AGGCGCGGGT GCAGACCGAT
TTGTCATTCC GCGTCGGCGG CAAGATCATT TCGCGTAGCG TCGACGTGGG CGATCACGTC
AAGGCCAACC AGGTGCTCGC CCGGCTTGAC CCGAAAGACC TGCAGAACAA TGTCGACTCG
GCCAAGGCCG AGGTATTCGC CGCGCAGGCG CGGGTCACCC AGACCAGTGC GGCCTTCGTG
CGCCAGCAAA AACTGCTGCC CAAGGGCTAC ACCAGCCAGA GCGAGTACGA TGCTGCCGAG
GCCGCGCTGC GCAGCAATCA GAGCGCACTC AAGGCCGCCC AGGCGCAACT GGCCAATGCC
AACGAGCAAC TCAGCTACAC CGCACTGGTC TCCGAGGCCG CCGGGGTGAT CACCGAGCGT
CAGGCCGAGG TTGGCCAGGT GGTGCAGGCG ACCATGCCGA TCTTCAGCCT GGCCGTCGAT
GGCGACCGCG ATGCGGTGTT CAACGTCTAC GAGTCGCTGC TGGTGGCGCC GCCCAGCGAT
GCCGGGGTAG TCGTGAGCCT GCTGGACGAT CCCAAGGTCC AGGCCCATGG CTTCGTACGT
GAAATCACCC CCACGGTGTC GGCGCAAAGC GGCACCGTAC AGGTCAAGGT AGGGCTCAAG
GACGTGCCGC CCGGGATGCA GTTGGGGGCA CCGGTTACTG CCACCACCAA CGCCCAGGGC
CGGCCCAGCA TCGAGCTGCC ATGGTCGGCA CTGACCAAGG CCTTGCATGA GCCTGCCGTG
TGGGTGGTGG GCGAGGGCGA CAAGGTGGAA CTGCGCAAGG TCGAAATCCG CCGTTACCTC
ACCGGCAAGA TCGTGGTCGC CAGCGGCCTG AAAGGCGGCG AGACCGTAGT GGTCAACGGC
GGCCAGTTGC TGCACCCCGG CATGCAGGTA CTGAAGGTCG ACGCCAAGGG CCCGGGGGGT
GAGCTATGA
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| Protein sequence | MALMRPLSVV CLGLLYMLTG CSKEEVPETL PRVGVQQVQP TDFAARVTLT GDVQARVQTD
LSFRVGGKII SRSVDVGDHV KANQVLARLD PKDLQNNVDS AKAEVFAAQA RVTQTSAAFV
RQQKLLPKGY TSQSEYDAAE AALRSNQSAL KAAQAQLANA NEQLSYTALV SEAAGVITER
QAEVGQVVQA TMPIFSLAVD GDRDAVFNVY ESLLVAPPSD AGVVVSLLDD PKVQAHGFVR
EITPTVSAQS GTVQVKVGLK DVPPGMQLGA PVTATTNAQG RPSIELPWSA LTKALHEPAV
WVVGEGDKVE LRKVEIRRYL TGKIVVASGL KGGETVVVNG GQLLHPGMQV LKVDAKGPGG
EL
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