Gene PP_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5127 
Symbol 
ID1041912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5847820 
End bp5849016 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID637148526 
Producthypothetical protein 
Protein accessionNP_747228 
Protein GI26991803 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.775226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC CCAGCCTTCG CCTCAAAGCC AATGCCGACC GCCGCCTGCG CGCCGGCCAC 
CTGTGGGTCT ACAGCAACGA AGTCGATGTC AGCGCGACCC CTTTGCAAGG CTTCCAGGCG
GGCCAGCAGG CCATTCTCGA GGCAGCCAAC GGCAAGCCGC TGGGCATCGT CGCGCTGAGT
CCGAACAACC TGATCTGCGC CCGCCTGCTG TCACGCGACA TCAAGCTGCC GCTGGACAAG
TCGCTGCTGG TACACCGCCT GAACGTCGCC CTGTCGCTGC GCGAGCGCCT GTTCGAGCAG
CCGTGCTACC GCCTGGTCTA CGGTGACTCC GACCTGCTCC CAGGCCTGGT GGTCGACCGT
TTCTTCGATA TCCTCGTGGT GCAGTTGGCC TCGGCCACCA TGGAAGCGCA CAAGGATGAC
GTGATCGCCG CACTGGTGCA GGTGCTCAAG CCCAGCGGCA TCCTGTTCAA GAACGATTCG
GCCGCGCGCG ACGCCGAAGG CCTGCAGCGC TATGTCGAGA CCGTCTACGG CGAAGTGCCG
GACTGGGTGC CGCTGGAAGA GAACGGCGTC AAGTTCGAAG CTCCGGTGCG CGAAGGCCAG
AAGACGGGCT GGTTCTACGA CCACCGCATG AACCGCGCCC GCCTGGCACC GTACGTGAAG
GGCAAGCGTG TACTCGACCT GTTCAGCTAC ATCGGCGGCT GGGGCGTGCA GGCCGGTGCC
TTCGGCGCCA GCGAAGTGTT CTGCGTCGAT GCCTCGGGCT TTGCCCTGGA CGGCGTGGAG
CGTAACGCTG CACTGAACGG CATCAGCGAG AAGCTGACCT GCATCGAAGG CGACGTGTTC
GAAGCCCTGC GAGAGCTCAA GGCGGCCGAA GAACGCTTCG ACGTGATCAT TGCCGACCCA
CCTGCCTTCA TCAAGCGCAA GAAGGACCTG AAAAACGGCG AAGCGGCCTA CCGCCGCCTG
AACGAACAGG CCATGCGCAT GTTGAACAAA GACGGCATCC TCGTCAGCGC CTCGTGCTCG
ATGCACCTGC CCGAGGACGA CCTGAACAAC ATCCTGCTGA CCAGTGCCCG CCACCTGGAC
CGCAACATGC AGCTGCTCGA GCGAGGCGGT CAGGGCCCGG ATCACCCGGT ACACCCGGCC
ATCGCCGAAA CCCGCTACAT CAAAAGCATC ACCTGCCGGT TACTGCCAAA CAGCTGA
 
Protein sequence
MSLPSLRLKA NADRRLRAGH LWVYSNEVDV SATPLQGFQA GQQAILEAAN GKPLGIVALS 
PNNLICARLL SRDIKLPLDK SLLVHRLNVA LSLRERLFEQ PCYRLVYGDS DLLPGLVVDR
FFDILVVQLA SATMEAHKDD VIAALVQVLK PSGILFKNDS AARDAEGLQR YVETVYGEVP
DWVPLEENGV KFEAPVREGQ KTGWFYDHRM NRARLAPYVK GKRVLDLFSY IGGWGVQAGA
FGASEVFCVD ASGFALDGVE RNAALNGISE KLTCIEGDVF EALRELKAAE ERFDVIIADP
PAFIKRKKDL KNGEAAYRRL NEQAMRMLNK DGILVSASCS MHLPEDDLNN ILLTSARHLD
RNMQLLERGG QGPDHPVHPA IAETRYIKSI TCRLLPNS