Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5127 |
Symbol | |
ID | 1041912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5847820 |
End bp | 5849016 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148526 |
Product | hypothetical protein |
Protein accession | NP_747228 |
Protein GI | 26991803 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.775226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCTGC CCAGCCTTCG CCTCAAAGCC AATGCCGACC GCCGCCTGCG CGCCGGCCAC CTGTGGGTCT ACAGCAACGA AGTCGATGTC AGCGCGACCC CTTTGCAAGG CTTCCAGGCG GGCCAGCAGG CCATTCTCGA GGCAGCCAAC GGCAAGCCGC TGGGCATCGT CGCGCTGAGT CCGAACAACC TGATCTGCGC CCGCCTGCTG TCACGCGACA TCAAGCTGCC GCTGGACAAG TCGCTGCTGG TACACCGCCT GAACGTCGCC CTGTCGCTGC GCGAGCGCCT GTTCGAGCAG CCGTGCTACC GCCTGGTCTA CGGTGACTCC GACCTGCTCC CAGGCCTGGT GGTCGACCGT TTCTTCGATA TCCTCGTGGT GCAGTTGGCC TCGGCCACCA TGGAAGCGCA CAAGGATGAC GTGATCGCCG CACTGGTGCA GGTGCTCAAG CCCAGCGGCA TCCTGTTCAA GAACGATTCG GCCGCGCGCG ACGCCGAAGG CCTGCAGCGC TATGTCGAGA CCGTCTACGG CGAAGTGCCG GACTGGGTGC CGCTGGAAGA GAACGGCGTC AAGTTCGAAG CTCCGGTGCG CGAAGGCCAG AAGACGGGCT GGTTCTACGA CCACCGCATG AACCGCGCCC GCCTGGCACC GTACGTGAAG GGCAAGCGTG TACTCGACCT GTTCAGCTAC ATCGGCGGCT GGGGCGTGCA GGCCGGTGCC TTCGGCGCCA GCGAAGTGTT CTGCGTCGAT GCCTCGGGCT TTGCCCTGGA CGGCGTGGAG CGTAACGCTG CACTGAACGG CATCAGCGAG AAGCTGACCT GCATCGAAGG CGACGTGTTC GAAGCCCTGC GAGAGCTCAA GGCGGCCGAA GAACGCTTCG ACGTGATCAT TGCCGACCCA CCTGCCTTCA TCAAGCGCAA GAAGGACCTG AAAAACGGCG AAGCGGCCTA CCGCCGCCTG AACGAACAGG CCATGCGCAT GTTGAACAAA GACGGCATCC TCGTCAGCGC CTCGTGCTCG ATGCACCTGC CCGAGGACGA CCTGAACAAC ATCCTGCTGA CCAGTGCCCG CCACCTGGAC CGCAACATGC AGCTGCTCGA GCGAGGCGGT CAGGGCCCGG ATCACCCGGT ACACCCGGCC ATCGCCGAAA CCCGCTACAT CAAAAGCATC ACCTGCCGGT TACTGCCAAA CAGCTGA
|
Protein sequence | MSLPSLRLKA NADRRLRAGH LWVYSNEVDV SATPLQGFQA GQQAILEAAN GKPLGIVALS PNNLICARLL SRDIKLPLDK SLLVHRLNVA LSLRERLFEQ PCYRLVYGDS DLLPGLVVDR FFDILVVQLA SATMEAHKDD VIAALVQVLK PSGILFKNDS AARDAEGLQR YVETVYGEVP DWVPLEENGV KFEAPVREGQ KTGWFYDHRM NRARLAPYVK GKRVLDLFSY IGGWGVQAGA FGASEVFCVD ASGFALDGVE RNAALNGISE KLTCIEGDVF EALRELKAAE ERFDVIIADP PAFIKRKKDL KNGEAAYRRL NEQAMRMLNK DGILVSASCS MHLPEDDLNN ILLTSARHLD RNMQLLERGG QGPDHPVHPA IAETRYIKSI TCRLLPNS
|
| |