Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5075 |
Symbol | gltD |
ID | 1041787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5791903 |
End bp | 5793321 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148474 |
Product | glutamate synthase subunit beta |
Protein accession | NP_747176 |
Protein GI | 26991751 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC GTCTGAACAA CGACTTCCAG TTCATCGAAG TGGGCCGAAA GGACCCGAAA AAAAAGCTGC TGCGCCAGCG CAAGAAGGAG TTCGTGGAAA TCTACGAACC GTTCAAGCCG CAGCAGTCCG TGGAGCAGGC GCACCGCTGC CTGGGCTGCG GTAACCCGTA TTGCGAGTGG AAGTGCCCGG TACACAACTT CATCCCCAAC TGGTTGAAGC TGGTCTCCGA AGGCAACATC CTGGCCGCGG CGGAACTGTC GCACCAGACC AACACCCTGC CGGAAGTATG CGGCCGTGTT TGCCCGCAAG ACCGCCTGTG CGAGGGTGCC TGCACCCTGA ACGACGGTTT CGGCGCGGTG ACCATCGGCT CGGTGGAGAA GTACATCACC GACACCGCCT TCGCCATGGG CTGGCGTCCG GACATGTCCA AGGTCAAGCC AACCGGCAAG CGCGTTGCCA TCATCGGCGC CGGCCCGGCG GGCCTGGGCT GCGCCGACGT GCTGGTGCGC GCCGGGGTAA CCCCGGTGGT GTTCGACAAA AACCCTGAGA TCGGTGGCCT GCTGACCTTC GGTATCCCCG AGTTCAAGCT GGAAAAGACC GTGCTCAGCA ACCGCCGTGA AGTGTTCACC GGCATGGGCA TCGAGTTCCG CCTGAACACC GAGGTGGGCA AGGATGTGAC CATGGAACAG CTGCTCGCCG AGTACGACGC GGTGTTCATG GGCATGGGTA CCTACACCTA CATGAAGGGC GGCTTCCCGG GTGAAGACCT GCCGGGCGTG CATGACGCAC TGGACTTCCT GATCGCCAAC GTCAACCGCA ACCTGGGCTT CGAGAAGTCG CCGGAAGACT TCGTCGACAT GCAGGGCAAG AAAGTGGTGG TGCTGGGCGG TGGTGACACC GCGATGGACT GCAACCGTAC CTCGATCCGT CAGGGTGCCA AGGCGGTGAC CTGTGCTTAT CGTCGTGACG AAGCCAACAT GCCGGGTTCG CGCAAAGAGG TTAAGAACGC CAAGGAAGAG GGCGTGAAGT TCCTCTACAA CCGTCAGCCC ATTGCCATTG TGGGCGAGGA CAAGGTCGAA GGCGTCAAAG TGGTCGAGAC TCGCCTGGGC GAGCCTGATG CCCGTGGCCG CCGCAGCCCT GAGCCAATCC CGGGCTCCGA AGAGATCCTG CCGGCAGACG CCGTGGTAAT CGCCTTCGGC TTCCGCCCGA GCCCGGCACC GTGGTTTGAA CAGCATGGCA TTCAGCTGGA CAGCCAAGGT CGTGTGGTTG CCCCGGAGAA GGGCAAGTTC AAGCACCAGA CCAGCAACCC GAAAGTGTTT GCCGGTGGCG ACATGGTGCG CGGTTCGGAC CTGGTGGTGA CTGCGATCTT CGAAGGGCGT ACGGCTGCCG AGGGTATCCT GGACTACCTC GAAGTCTGA
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Protein sequence | MAERLNNDFQ FIEVGRKDPK KKLLRQRKKE FVEIYEPFKP QQSVEQAHRC LGCGNPYCEW KCPVHNFIPN WLKLVSEGNI LAAAELSHQT NTLPEVCGRV CPQDRLCEGA CTLNDGFGAV TIGSVEKYIT DTAFAMGWRP DMSKVKPTGK RVAIIGAGPA GLGCADVLVR AGVTPVVFDK NPEIGGLLTF GIPEFKLEKT VLSNRREVFT GMGIEFRLNT EVGKDVTMEQ LLAEYDAVFM GMGTYTYMKG GFPGEDLPGV HDALDFLIAN VNRNLGFEKS PEDFVDMQGK KVVVLGGGDT AMDCNRTSIR QGAKAVTCAY RRDEANMPGS RKEVKNAKEE GVKFLYNRQP IAIVGEDKVE GVKVVETRLG EPDARGRRSP EPIPGSEEIL PADAVVIAFG FRPSPAPWFE QHGIQLDSQG RVVAPEKGKF KHQTSNPKVF AGGDMVRGSD LVVTAIFEGR TAAEGILDYL EV
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