| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4949 |
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| Symbol | |
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| ID | 1041892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5637366 |
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| End bp | 5638904 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148350 |
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| Product | TldD/PmbA family protein |
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| Protein accession | NP_747052 |
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| Protein GI | 26991627 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.906043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGC ATTGCTCGAG GCACACGACG ATACCTGCCT CGGCATGCAA GACGGGTGGT
TCTAGGGGGA GCCACCGTGT ACACGGAGGC ATCCGCATGT TCGATTCCAG CGCCCTGCTG
CGCCAGCGCT TTGCTGCGCT GCGCAGTACG GCCGAGTTGT TTTCCCTGCG CCATGTGAAA
CAGTCGCACC AGGCGCTTTC GGTTCGCCGC AACGTCGCCG AACCACCCTT CTTCAGCCAG
GATGAGGGCG CCATGCTCAC CGTGCGGGTC AATGGCGTGG AGGCCTACGC TGCCACCGCC
GACCTGTCCC AGGCTGGCCT GCAGCGCGCC CTTGAGCAAG CCGAGGCGCT GGCGCGGCAG
ATCGCCCGGC ACAGCCTGCT GGACCTGCGC GAGCACGCCG TGACCAGCGC ACGGCACGAC
CATGTGTCGC CCAACTTCGA CCAACCCGTA CCCAGCCTCG CCGACTGCCT TGGCCTGCTC
GCCGCCGAAT CGGCCAGCGT GCCCAAGGAC AGCCGTTTGG TGGACTGGCA GGCCAGCCTG
GGGCTGAGCC TGGTCGAGCA AACCTACCTG AACTCGGCCG GCGCCGAACT GCGCCATGCC
CAGCGCTTCC TGTTCCCGGG CCTGGGGGTG ACCGCCAGCG ACGGCCAGGA CAGCCAAAGC
CGCAGCCTGG GCCGCGACAA CTTCGGCCAA CAGGGTGGTT TCGAGATCAT CGAGCGCTGC
GGCCTGGTCG GCGCGGCCAG CCGGGTGGCC GAAGAAGCAC TGCAACTGCT GCTGGCACCG
AACACCCCCA GTGGCCCGCG CGACCTGCTG TTGATGCCGG ACCAGATGAT GCTGCAGATT
CACGAATCCA TCGGCCACCC GCTGGAGATG GACCGCATTC TCGGCGACGA GCGCAACTAC
GCCGGCACCA GCTTCGTCAA AACCAGCGAC TTCGGCCACC TGCAGTACGG CTCCAGCCTG
CTGAACGTGA CCTTCGACCC GACCATTGGC GAAGAGCTGG CCAGCTACAG TCATGACGAC
GACGGCACCC CGGCCAGCAA AGCGTTCCTG ATACGCGACG GCCTGCTGCT GCGCCCGCTG
GGTGGCGCGC TGTCGCAGTT CCGCTCTGGC CTGGACGGCG TGGCCAACAG CCGTGCCTGC
GGCTGGAACC GCGCGCCGAT CGACCGCATG GCCAACCTCA ACATCGAGCC GGGCGACCAG
TCTTTCGAGC AACTGATCGG AGGCATCGAG CACGGCATCC TGATGCGTAC CAACCGTTCC
TGGTCCATCG ACGATGCGCG CAACAAGTTC CAGTTCGGCT GCGAATGGGG CCAGTTGATT
GAAAATGGCG AGCTCAAGGG CATCGTCAAG AACCCCAACT ACCGCGGCAT CTCCGCGCAG
TTCTGGCGCA ACCTGTCGGC GGTTGGCGAC CACAGTACCT TCCAGGTGCT GGGCACGCCC
AACTGTGGCA AGGGCGAACC CAATCAGGTG GTGCGGGTCG GCCACGCCTC GCCGGCCTGT
GTGTTCCGCC AGATCGATGT ATTCGGAGGA GACGCCTGA
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| Protein sequence | MSWHCSRHTT IPASACKTGG SRGSHRVHGG IRMFDSSALL RQRFAALRST AELFSLRHVK
QSHQALSVRR NVAEPPFFSQ DEGAMLTVRV NGVEAYAATA DLSQAGLQRA LEQAEALARQ
IARHSLLDLR EHAVTSARHD HVSPNFDQPV PSLADCLGLL AAESASVPKD SRLVDWQASL
GLSLVEQTYL NSAGAELRHA QRFLFPGLGV TASDGQDSQS RSLGRDNFGQ QGGFEIIERC
GLVGAASRVA EEALQLLLAP NTPSGPRDLL LMPDQMMLQI HESIGHPLEM DRILGDERNY
AGTSFVKTSD FGHLQYGSSL LNVTFDPTIG EELASYSHDD DGTPASKAFL IRDGLLLRPL
GGALSQFRSG LDGVANSRAC GWNRAPIDRM ANLNIEPGDQ SFEQLIGGIE HGILMRTNRS
WSIDDARNKF QFGCEWGQLI ENGELKGIVK NPNYRGISAQ FWRNLSAVGD HSTFQVLGTP
NCGKGEPNQV VRVGHASPAC VFRQIDVFGG DA
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