| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4941 |
|---|
| Symbol | |
|---|
| ID | 1043917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5622329 |
|---|
| End bp | 5623732 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148342 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | NP_747044 |
|---|
| Protein GI | 26991619 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.979997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCA AGCAGCAGTT GCTCAAGCGC CACCGGCGCA ACAAACGCCT GGGGCTGCTG
GCGGGCCTGG TTGCGCTGGT CGCCCTCGGT GTTTTCAGCT GGTGGTGGCT GCCACTGCTG
CTGTTGCCGC TGCTCTGGGC TGCCCATGAG GCCTGGTTTG CCGACCACCT GTTCTATGCA
CCGGGTGAGG ACTATGCCTA CGACTTCGGC GATCAGGTGC AGCAGGTTCC TGCCAGCCTG
CACGATGGCT GGCTCAAGGC TGATTGCACG TTGCAAGGCG ACGAAACCCT GGTGCTTGAA
CTGCGGCTAA AAAGCAGCTG GTTGGGGCGC TTTCTCGACC CTCGGGTCGA GCTGCTGGCT
GGCGAACAGG CCGATCGGCA AGCGTTCGAG CGTGGCGTCG ATGGCGTGCG CTTCCTTAAC
CTGACGGGTC TTGCTGCGCC ACTGCAGGCC GGTACGTTGC GACTGCGCGG CCGGCATTGC
CGGCTGCAGG GTCAGTTGCG CCTGTGGATA ACCCCCTCGG TCGAGCTGCA GCGGCGCCGG
GTGATGGTGA TCGCGCCACA TGCCGATGAC GCCGAGTTGG CCGCGTATGG TTTGTACAGC
CGGGCCGACG AAAGCTGGGT GGTGACCCTG ACCGCCGGTG AGATAGAGGC CGAGCACTAC
CAGCAGATGG GCCTGGCAAA GGCCGAGGCC GCGCGCCTGA AGGGGCGCCT GCGTGCCTGG
GACAGCATCG TCGTGCCGCG TTGGGCCGGC GTGCCGGAGT CGCGTTGCAT ACAGCTGGGC
TACTTTTGCC TGCAGCTGCC TGCCATGCAG GCAGCACCCG ACCAGCCGGC CGCCTCACGT
GAAGCCGACC TGGCCGATAT CCGCGTGTTC CGCCAGTTCA ACCCGTTCCC GTTACCGGGC
GACCGCGATG GCGCACCCAC CTGGCACAAC CTGCTGGCCG ACCTGCGAGC CTTGCTGGAG
CTGGCCAAAC CAGAGGTGCT GGTGATGCCG CACCCGCAGC TAGACCCCCA TCCGGACCAT
ATCTGCGCTC AGGCGGCGGT ATTGGAAGCC TTGCAAGGCA TGGCATGGCA GCCACAAACC
TTGCTGTGCT ACGCCAACCA CCTGCACGAT AACGACCGCT GGCCGATGGG CGACAGTGGC
GATGGCGTGG CTTTACCGCC GCAATTGAGC GCTGCCCAGG CTTGGGCACC CTGCAGCCTG
GTGCTGGACT GCGCGATCCA GCGCGACAAG GCGATGGCCC TGGGCATGAT GCACGACCTG
CAGCCGCCGG CACCGTTCAA GCGCCGCCTG CGCCGCCTGC TGCAACGCTG GCTTGCCGGG
CGACAGCCAT CGCCTTATGG GGAGAACGAA TTCTTCCGCA AGGCCGTGCG CCGACACGAA
CTGTTCTGGC GGCGTGAGCT GTAA
|
|---|
| Protein sequence | MSRKQQLLKR HRRNKRLGLL AGLVALVALG VFSWWWLPLL LLPLLWAAHE AWFADHLFYA
PGEDYAYDFG DQVQQVPASL HDGWLKADCT LQGDETLVLE LRLKSSWLGR FLDPRVELLA
GEQADRQAFE RGVDGVRFLN LTGLAAPLQA GTLRLRGRHC RLQGQLRLWI TPSVELQRRR
VMVIAPHADD AELAAYGLYS RADESWVVTL TAGEIEAEHY QQMGLAKAEA ARLKGRLRAW
DSIVVPRWAG VPESRCIQLG YFCLQLPAMQ AAPDQPAASR EADLADIRVF RQFNPFPLPG
DRDGAPTWHN LLADLRALLE LAKPEVLVMP HPQLDPHPDH ICAQAAVLEA LQGMAWQPQT
LLCYANHLHD NDRWPMGDSG DGVALPPQLS AAQAWAPCSL VLDCAIQRDK AMALGMMHDL
QPPAPFKRRL RRLLQRWLAG RQPSPYGENE FFRKAVRRHE LFWRREL
|
|---|
| |