| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4907 |
|---|
| Symbol | rhdA-2 |
|---|
| ID | 1042587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5577855 |
|---|
| End bp | 5578664 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637148308 |
|---|
| Product | rhodanese domain protein |
|---|
| Protein accession | NP_747010 |
|---|
| Protein GI | 26991585 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TTTCCGGCCT GCCCCTGGTG ATCGAAGCTG CAGACCTGCT GCCACGCCTG
GATTCGCCGC AACTGATCCT GGTCGACCTG AGCAGCGCCA ACCGCTATGT CAGCGGGCAT
ATCCCCGGCG CGCGCTTTGT CGAAGGCAAG CGCACCCAGC TCGGCCAGCC CCCGGCGCCC
GGCCTGCTGC CAGCCCTGGG CGAGCTCGAA AAACTGTTCA GCGAACTCGG CCACCGCGCC
GATGCCGTGT ATGTGGTGTA CGACGATGAA GGCGGCGGCT GGGCCGGGCG CTTCATCTGG
CTGCTCGATG TCATCGGCCA CAAGCACTAC CACTACCTCA ATGGCGGTAT CCAGGCCTGG
CCGGCAGACA AACTGTCCAC CGAAGTGCCT GCCATTGGCA ACGCCCCGGT GCACCTGCAC
ATAGACAGCG CACCCACTGC CACCCGCGAG TACCTGCAAA GCCGCCTGGG CGCCGATGAC
CTGGTCATCT GGGACGCACG CGGCCCGCAG GAATTCAGCG GCGAAAAAGT GCTGGCAGCC
AAAGGCGGCC ACATCCCCGG CGCGATCAAC TTCGAGTGGA CCGCCGGCAT GGATCTCAAC
GACCACCTGC GCATTCGCCA GGACATCAAA CAAGTCCTCG AGCAACTGGG CATCACCCCT
GACAAGGAGG TGATCACCCA CTGCCAGACC CACCGCCGCT CCGGTTTCAC TTACCTGGTG
GCCAAGGCCC TCGGCTACCC ACGCGTCAAG GCCTACGCCG GCTCGTGGAG TGAATGGGGC
AACCACCCGG ACACGCCTGT AGAAGTCTAA
|
|---|
| Protein sequence | MTDFSGLPLV IEAADLLPRL DSPQLILVDL SSANRYVSGH IPGARFVEGK RTQLGQPPAP
GLLPALGELE KLFSELGHRA DAVYVVYDDE GGGWAGRFIW LLDVIGHKHY HYLNGGIQAW
PADKLSTEVP AIGNAPVHLH IDSAPTATRE YLQSRLGADD LVIWDARGPQ EFSGEKVLAA
KGGHIPGAIN FEWTAGMDLN DHLRIRQDIK QVLEQLGITP DKEVITHCQT HRRSGFTYLV
AKALGYPRVK AYAGSWSEWG NHPDTPVEV
|
|---|
| |