| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4885 |
|---|
| Symbol | |
|---|
| ID | 1043824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5553366 |
|---|
| End bp | 5554337 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637148286 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746988 |
|---|
| Protein GI | 26991563 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0979241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGG CGCGCAGCTT CATTAATCCG CATGCGCAGT CGTATGAGTC GCTGAAGGCC
GATACGCCCA TGAACGCGAA TCAGCGGGCC AAGTTTGATG TGCTGAATGC GCATGTCGTC
AACACTGTTG TATTCCCTGG CGAGCTGATA ATTGTGGGTG ACCCAAGCAC GCCGTCCTGT
ACTGCTCATG AGGCATTTCT CATGGGTAAG GCGTTAGGTA TACACCTTGA CATCGAATTG
AACGGCGGTG GGTTTGACGG TTTCCTTCTG GAGAATTTTG AGCTGCTGCA GAGCTTACTG
GCCCGTGCTT CCATCGGGGC TGGTACTGCT AGTGACGCTT GGAGTAAGCA TCTTGAAGCT
ATCAAGAAAA CGTTAGAGGA GATAGAGCAG CTACATCGAG ATTATTTGCT TAAAGGTACG
TTGAAAGCTC GTGATGAATT CTACTCGAAG CGCACAGCGC TGTTTTTAAA GTTGGAGGCG
CAGCTTGATA GTATGGCTAC GTATGGGGTG GGGCTGCGCA ATGGGGGTAA AATCAAGCAT
GCGCTGGATA TATCCACCAA AAGATTTCTT CACGGTGGTG AGATTAAAGG GTATGCAGAA
AAAATATCTG GCGTAGCGAA GGCGGCTAAT TGGATAAAAA AAGGGACGTA TTTAGGGATG
GCGCTTGATG TGGCGTCAAC CGAACTGTCA ATTCGTAACG CTTGCGTGCT TGGGCGGGAG
GAGGAGTGCA GAAAGGCTGA GTATGTCGAG AGGACTTCGC TAGTTGCGAG CTTGGGGCTA
GGAGGAATGG GTGGACATGT CGGGGGCCTA TTGGGGCCAA TAGCATGTGT TGCTGTAGGT
ATTCCCACCG GTGGAACGGC AACTTTCGCA TGTGCGGTAT TGGGGGGAGC GGCTGGAGGT
ATTGCTGGCG GTGAGTTTGG TGAGGTATTG GGAGAAAGCG TGGGGGAGAT TTTGTATGAG
GCAGTGCGAT GA
|
|---|
| Protein sequence | MSEARSFINP HAQSYESLKA DTPMNANQRA KFDVLNAHVV NTVVFPGELI IVGDPSTPSC
TAHEAFLMGK ALGIHLDIEL NGGGFDGFLL ENFELLQSLL ARASIGAGTA SDAWSKHLEA
IKKTLEEIEQ LHRDYLLKGT LKARDEFYSK RTALFLKLEA QLDSMATYGV GLRNGGKIKH
ALDISTKRFL HGGEIKGYAE KISGVAKAAN WIKKGTYLGM ALDVASTELS IRNACVLGRE
EECRKAEYVE RTSLVASLGL GGMGGHVGGL LGPIACVAVG IPTGGTATFA CAVLGGAAGG
IAGGEFGEVL GESVGEILYE AVR
|
|---|
| |