Gene PP_4860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4860 
Symbol 
ID1043333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5526485 
End bp5527618 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content64% 
IMG OID637148261 
ProductN-acylglucosamine 2-epimerase 
Protein accessionNP_746965 
Protein GI26991540 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000600017 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCCCT GCCCGACAGC GACGAGCGCC CAAATGTCCG ACCCCCGCCC CACCCTGCCC 
GAACTGGCCC GCTTCAACCA GCACTTCGCC GAACGCATCG TGCCGCTGTG GCAAGGCCCG
GGCTGGAACG CCGACATGGC CCTGCCCTAC GAAGCGCTGG ACGCCCAGCA CCAACCGTTG
CCGGTGCAGC GCTACCGGGC CATGGCCTGT GCACGCCAGC TGTACGTGTT CAGCAGCCGT
ATCGGCCAGC CGGGCGCCGC CGAACGCGCC GCAGCCCTGT TTCGCTCGCT GCAAAAGCAC
TTCCACGATG CCGAGCACGG GGGCTGGTTC TACAGCATCG ACGCCCAAGG CAAGCCGCTG
GACCGGCGCA AGGACCTGTA TACCCACGCC TTCATCGTGT TCGCCTGCGC GCACTACTGG
GGCAAAGTGC GCGAAAACCT GGTGGAGTCC ACGTTGAATG CCGCGCTGGA CATCATCGAC
CAGCAGTTCG CCCGTGACGA TGGCCTGTAC GAAGCCTGCC TGGGCGAAGA CTGGGCCGAC
CTCGGCAGTG GCCCGCTGCA GAATCCGCAG ATGCACCTGG CCGAAGCGTT CCTGCAGGTA
CTGGCTGTGC GTGACGACGA ACATGTCCGC CAGTCGCTGC TGCAATTGTG TCAGGCACTC
GAGGCGCATT TCATTGAACC GGCCCATGGC CTGATGCTGG AAAAGCCACG CGGGGCTGTG
GATAACTGGT TCGAGCCTGG GCACCAGTTC GAGTGGTTCT ATCTGCTGCA TACCTCCCCG
CTGCTGCGTG ACACCCCGCT GCATGCGTCA ATAGACCGGG CTTTCGCCTT TGCCGAGCAA
TTCGGGGTGA AGGATGCGGC CGTACTGGCC ATGCTGAATG TGGATGGCCG GGTGCTTGAT
GCCTCCCAGC GTATCTGGGC GCAGGCCGAG TACCTGCGGG CGCTTACATT GCGTGAAGGC
AGTGAAGCAA AGCTCGCGGG GCAGTTGGGC GCCCTTTCAG CGCGGTTCCT GCGTGACGCC
GGCTGGTATG AGTGCCGAGG GGGTGACGGC GCGGTGAGCA GGGATGACAT GCCATCGACC
ACGCCTTATC ACTTGGCTAC CTGCCTGGAA GGGCTGAATC AGGCGAACAT CTAA
 
Protein sequence
MAPCPTATSA QMSDPRPTLP ELARFNQHFA ERIVPLWQGP GWNADMALPY EALDAQHQPL 
PVQRYRAMAC ARQLYVFSSR IGQPGAAERA AALFRSLQKH FHDAEHGGWF YSIDAQGKPL
DRRKDLYTHA FIVFACAHYW GKVRENLVES TLNAALDIID QQFARDDGLY EACLGEDWAD
LGSGPLQNPQ MHLAEAFLQV LAVRDDEHVR QSLLQLCQAL EAHFIEPAHG LMLEKPRGAV
DNWFEPGHQF EWFYLLHTSP LLRDTPLHAS IDRAFAFAEQ FGVKDAAVLA MLNVDGRVLD
ASQRIWAQAE YLRALTLREG SEAKLAGQLG ALSARFLRDA GWYECRGGDG AVSRDDMPST
TPYHLATCLE GLNQANI