Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4860 |
Symbol | |
ID | 1043333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5526485 |
End bp | 5527618 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148261 |
Product | N-acylglucosamine 2-epimerase |
Protein accession | NP_746965 |
Protein GI | 26991540 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000600017 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCCCT GCCCGACAGC GACGAGCGCC CAAATGTCCG ACCCCCGCCC CACCCTGCCC GAACTGGCCC GCTTCAACCA GCACTTCGCC GAACGCATCG TGCCGCTGTG GCAAGGCCCG GGCTGGAACG CCGACATGGC CCTGCCCTAC GAAGCGCTGG ACGCCCAGCA CCAACCGTTG CCGGTGCAGC GCTACCGGGC CATGGCCTGT GCACGCCAGC TGTACGTGTT CAGCAGCCGT ATCGGCCAGC CGGGCGCCGC CGAACGCGCC GCAGCCCTGT TTCGCTCGCT GCAAAAGCAC TTCCACGATG CCGAGCACGG GGGCTGGTTC TACAGCATCG ACGCCCAAGG CAAGCCGCTG GACCGGCGCA AGGACCTGTA TACCCACGCC TTCATCGTGT TCGCCTGCGC GCACTACTGG GGCAAAGTGC GCGAAAACCT GGTGGAGTCC ACGTTGAATG CCGCGCTGGA CATCATCGAC CAGCAGTTCG CCCGTGACGA TGGCCTGTAC GAAGCCTGCC TGGGCGAAGA CTGGGCCGAC CTCGGCAGTG GCCCGCTGCA GAATCCGCAG ATGCACCTGG CCGAAGCGTT CCTGCAGGTA CTGGCTGTGC GTGACGACGA ACATGTCCGC CAGTCGCTGC TGCAATTGTG TCAGGCACTC GAGGCGCATT TCATTGAACC GGCCCATGGC CTGATGCTGG AAAAGCCACG CGGGGCTGTG GATAACTGGT TCGAGCCTGG GCACCAGTTC GAGTGGTTCT ATCTGCTGCA TACCTCCCCG CTGCTGCGTG ACACCCCGCT GCATGCGTCA ATAGACCGGG CTTTCGCCTT TGCCGAGCAA TTCGGGGTGA AGGATGCGGC CGTACTGGCC ATGCTGAATG TGGATGGCCG GGTGCTTGAT GCCTCCCAGC GTATCTGGGC GCAGGCCGAG TACCTGCGGG CGCTTACATT GCGTGAAGGC AGTGAAGCAA AGCTCGCGGG GCAGTTGGGC GCCCTTTCAG CGCGGTTCCT GCGTGACGCC GGCTGGTATG AGTGCCGAGG GGGTGACGGC GCGGTGAGCA GGGATGACAT GCCATCGACC ACGCCTTATC ACTTGGCTAC CTGCCTGGAA GGGCTGAATC AGGCGAACAT CTAA
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Protein sequence | MAPCPTATSA QMSDPRPTLP ELARFNQHFA ERIVPLWQGP GWNADMALPY EALDAQHQPL PVQRYRAMAC ARQLYVFSSR IGQPGAAERA AALFRSLQKH FHDAEHGGWF YSIDAQGKPL DRRKDLYTHA FIVFACAHYW GKVRENLVES TLNAALDIID QQFARDDGLY EACLGEDWAD LGSGPLQNPQ MHLAEAFLQV LAVRDDEHVR QSLLQLCQAL EAHFIEPAHG LMLEKPRGAV DNWFEPGHQF EWFYLLHTSP LLRDTPLHAS IDRAFAFAEQ FGVKDAAVLA MLNVDGRVLD ASQRIWAQAE YLRALTLREG SEAKLAGQLG ALSARFLRDA GWYECRGGDG AVSRDDMPST TPYHLATCLE GLNQANI
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