Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4858 |
Symbol | |
ID | 1041919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5525210 |
End bp | 5525707 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148259 |
Product | hypothetical protein |
Protein accession | NP_746963 |
Protein GI | 26991538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.21 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000568872 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACGCC ATCTGCTGAC CCTGACCCTG TCCCTTCTGG CCGCCAACGC TTTCGCCCTG CCGGCGTCCG AGCAACACCT GACGTCAGAA GCGCGCTCCA GCGCTGCCGA AATCGCCCAG CCGCTGAACA CCGTAGCTGA AGGCGGCTCC GATCGCCTGA TCGAACGTTC TGGCCGCGTT GCTGAAGGTG GCTCCGATCG CCTGATCGAA CGTTCTGGCC GCGTTGCTGA AGGTGGCTCC GATCGCCTGA TCGAACGTTC TGGCCGTGTT GCTGAAGGTG GCTCCGATCG TCTGATCGAA CGTTCTGGCC GCGTTGCTGA AGGTGGCTCC GATCGTCTGA TCGAACGTTC TGGCCGTGTT GCCGAAGGTG GCTCGGATCG TCTGATCGAA CAAGCTGGCC GTGTTGCCGA AGGCGGCTCC GATCGTCTGA TCGAACAAGC TGGCCGTGTC GCTGAAGGTG GCTCGGATCG CCTGGTTGAA CTCAGCCGTG TGAGCTGA
|
Protein sequence | MKRHLLTLTL SLLAANAFAL PASEQHLTSE ARSSAAEIAQ PLNTVAEGGS DRLIERSGRV AEGGSDRLIE RSGRVAEGGS DRLIERSGRV AEGGSDRLIE RSGRVAEGGS DRLIERSGRV AEGGSDRLIE QAGRVAEGGS DRLIEQAGRV AEGGSDRLVE LSRVS
|
| |