| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4857 |
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| Symbol | |
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| ID | 1041952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5522803 |
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| End bp | 5524869 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148258 |
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| Product | AsmA family protein |
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| Protein accession | NP_746962 |
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| Protein GI | 26991537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000523424 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGTC CCGCCAGAAT CCTCGTCTGG ACCCTCGCCA GCCTGCTTAC CGTGCTGGCG
ATCCTGGTGG TAGTGATTGC CACCTTCGAC TGGAACCGCG TCAAGCCACT GCTCAACGAG
AAGGTCTCTG AAGCCTTGCA TCGGCCCTTC GCGATCAACG GCAACCTCGC CGTGCACTGG
CGTACCGAGC CCGAAGAGGG CGGGTGGCGT GCCTGGGTGC CTTGGCCGCA CTTCATTGCC
GAAGACCTGA CGCTGGGCAA CCCCGAGTGG CTCAAGGAGC CGAAGATGGT CGGCCTTGAG
CGTGTGGAGT TTCGCCTGGC GCCGCTGCCG CTGATGTTCC AGCAGATCAG CATACCCCGC
ATCAACCTCA CCAAGCCCAC TGCCAGCCTC ACTCGCCTGG CCGATGGCCG CGCCAACTGG
GTCTTCGACT TCGGCCCCAA GGATGAAAAC GCCGAACCTT CCAAATGGCA GCTGGACATC
GGCGCCATCG GCTTTGACCA GGGCAACGTC AGCTTCGACG ACCAGACCCT GAAAACCAGC
ATGAAGGTGC AGATCGACCC GCTTGGCAAG CCAATCCCGT TCAGTGAGAT TGTCGGCAAG
GCCAGCGCCG AGAAGGCCGG CGGTGCTCAG GACTATGCCT TCGGCCTCAA GGCCCAGGGC
CGCTACAAAG GCCAGCCAGT GTCCGGCACC GGCAAGATCG GTGGCCTGCT GGCCCTGCAG
GACGCCAGCC AGCCGTTCCC GCTGCAGGCC GACGTGCGCA TCGCCGACAC CCATGTGGTG
CTCGCCGGCA CCCTCACCGA CCCGCGCAAC CTTGGTGCCC TCGACCTGCG CCTGCGTTTG
TCGGGTGCCA GCCTGGGCAA CCTCTACCCA TTGACCGGCG TCACCTTGCC TGACACCCCG
GCCTATTCCA CCGACGGCCA CCTACGCGCC AACCTGCAGG CGGCGCAAGG GGCGTCGTTC
AATTACCAGG GCTTCAACGG CAAGATCGGC GACAGCGATA TACATGGGGA CCTGGCCTTC
GTTGCCAGCC AGCCACGGCC TAAACTGTCC GGCAACCTGG TATCGAACCA GTTGCTGTTC
AAGGACCTGG CGCCGCTGAT CGGTGCCGAC TCCAATGCCG AACAGAAGGC CCGTGGCGGT
GCCAGCAAGC AGCCGGCAGG CAAGGTGCTG CCAGTGGAGG CGTTTCGCAC CGAGCGTTGG
CGGGCAATGG ACGCTGATGT CACCTTTGCT GGCAAGCGCA TCGTGCACAG CGCGCAACTG
CCGTTCACTG ACCTGTCGGC CCATGTGGTG CTCGAAGACG GCCTGTTACG CCTGGAGCCC
CTGCGCTTTG GCGTGGCCGG CGGCAGCCTG GCCTCCAACA TCCGCCTGGA CGGGCGCAGC
GTGCCCTTGC AGGGGCGCGC GAAGTTGACT GCGCGTGGCT TCAAGCTCAA GCAACTGTTC
CCTACCTTCG CGCCAATGCA GACCAGCTTT GGTGAGCTCA ATGGCGACGC CGACATCAGC
GGCCGTGGCA ACTCGGTAGC CGCCTTGCTG GGTACAGCCA ATGGCGACTT GCGCATGCTG
ATCAACGATG GCGCCATCAG CCGCAGCCTG ATGGAAATTG CAGGCTTGAA CGTGGGCAAC
TATGTGGTCG GCAAGCTGTT TGGTGATGAG GACGTGAAAA TCAACTGTGC GGCGGCCGAT
GTGGGCATCA AGGATGGCCT GGCGACTACG CGGCTGTTCA TCTTCGATAC CGAGAACGCG
ATCATCTACA TCGACGGCAC GGCGAACTTC GCTTCCGAGC AACTGGATTT GAACATCACC
CCTGAATCGA AAGGGCTGCG GTTGTTCTCG CTGCGTTCCC CCCTGTATGT GCGCGGACCG
TTCGCCAAGC CGAACGCCGG TGTGCAGGCA TTGCCGCTGG CGTTGCGTGG CGCAGGGATG
GTTGCGCTGG GGGTGGTGGC AGGGCCGGCG GCGGGGTTGC TGGCGCTGAT TGCGCCCAGC
AGCGGGGATG ACCCGAACCA GTGCACACCG TTGTTGCAGC AGATGAAGGC AGGCAAGGCG
CCGACGGCGG TGAAAGCACG GAAATAG
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| Protein sequence | MTRPARILVW TLASLLTVLA ILVVVIATFD WNRVKPLLNE KVSEALHRPF AINGNLAVHW
RTEPEEGGWR AWVPWPHFIA EDLTLGNPEW LKEPKMVGLE RVEFRLAPLP LMFQQISIPR
INLTKPTASL TRLADGRANW VFDFGPKDEN AEPSKWQLDI GAIGFDQGNV SFDDQTLKTS
MKVQIDPLGK PIPFSEIVGK ASAEKAGGAQ DYAFGLKAQG RYKGQPVSGT GKIGGLLALQ
DASQPFPLQA DVRIADTHVV LAGTLTDPRN LGALDLRLRL SGASLGNLYP LTGVTLPDTP
AYSTDGHLRA NLQAAQGASF NYQGFNGKIG DSDIHGDLAF VASQPRPKLS GNLVSNQLLF
KDLAPLIGAD SNAEQKARGG ASKQPAGKVL PVEAFRTERW RAMDADVTFA GKRIVHSAQL
PFTDLSAHVV LEDGLLRLEP LRFGVAGGSL ASNIRLDGRS VPLQGRAKLT ARGFKLKQLF
PTFAPMQTSF GELNGDADIS GRGNSVAALL GTANGDLRML INDGAISRSL MEIAGLNVGN
YVVGKLFGDE DVKINCAAAD VGIKDGLATT RLFIFDTENA IIYIDGTANF ASEQLDLNIT
PESKGLRLFS LRSPLYVRGP FAKPNAGVQA LPLALRGAGM VALGVVAGPA AGLLALIAPS
SGDDPNQCTP LLQQMKAGKA PTAVKARK
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