Gene PP_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4856 
Symbol 
ID1041936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5522257 
End bp5522763 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content59% 
IMG OID637148257 
Productbacterioferritin, putative 
Protein accessionNP_746961 
Protein GI26991536 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.192046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00133905 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAACCC TGCGCGAGCG TGCACGCCAG CATGTGGAGC AAGGCGCAGT GACCGAGGGT 
TACCACGCCG ACCGTGAACA GATCCTGCGC CTGCTTAATG AATCGCTGGC CACCGAGCTG
GTCTGTGTGC TGCGCTACAA GCGCCACTAC TTCATGGCCA GCGGCATCAA AGCCAGTGTG
GCTGCCGAGG AGTTTCTGGA ACATGCCAAC CAGGAAGCCG AACATGCCGA CAAATTGGCC
GAACGCATCG TGCAACTGGG CGGGGAGCCG GACTTCAACC CCGACAACCT GACCAAGCAC
TCGCATGCCC AGTACGTGGC CGGCAATTCG CTCAAAGAGA TGGTGCTGGA AGACCTGGTG
GCAGAGCGCA TTGCCATCGA CAGCTACCGC GAGATCATTC AATACATCGG GGATAAAGAC
CCGACTACCC GTCGTATCTT CGAAGACATC CTGGCGCAGG AAGAGGAGCA CGCGGACGAT
ATGTCCGACC TGTTGCAAGG CCTTTGA
 
Protein sequence
MKTLRERARQ HVEQGAVTEG YHADREQILR LLNESLATEL VCVLRYKRHY FMASGIKASV 
AAEEFLEHAN QEAEHADKLA ERIVQLGGEP DFNPDNLTKH SHAQYVAGNS LKEMVLEDLV
AERIAIDSYR EIIQYIGDKD PTTRRIFEDI LAQEEEHADD MSDLLQGL