| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4842 |
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| Symbol | |
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| ID | 1041898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5510246 |
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| End bp | 5511286 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148243 |
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| Product | branched-chain amino acid ABC transporter, permease protein, putative |
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| Protein accession | NP_746947 |
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| Protein GI | 26991522 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.25148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.358489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTGC TGGGTGAAAC CGGCGACCCG CTGGCCCGCA CCCGCCTCGA AGCCCTGCTG
CAGCCCGATG CAGAACTAGA CCCGGGCGTG CGCACAGCCG CCGAAACGAG CCTGGCCCAG
GTCAAGCGCA AACTGCTGCT AGGCGAACTG CTCGGCCAGG CCTTCAGCGG CCTGTCGCTG
GGTTCGGTCC TGCTGCTGGC AGCGCTGGGC CTTGCGATCA CCTTCGGCCT GCTCGGGGTG
ATCAACATGG CCCATGGCGA GATGTTGATG CTCGGCGCCT ACAGCACCTA CATGGTCCAG
GTACTGCTGC AGCGCTTCGC CCCAGGCGCC ATCGAGTTCT ACCCGCTGAT TGCCCTGCCG
GTGGCCTTCG CCGTCAGTGC CGGGGTAGGC ATGGCGCTGG AGCGCACGGT GATCCGCCAC
CTGTACGGCC GCCCACTGGA AACCCTGCTG GCCACCTGGG GCATCAGCCT GATCCTGATC
CAGGCCATCC GCCTGCTGTT CGGCGCGCAG AACGTCGAGG TGAGCAACCC GGCCTGGCTG
TCTGGCGGCA TCCAGCTGCT ACCCAACCTG GTGCTGCCGT ACAACCGCCT GGTCATCATC
GGCTTCGCCC TGGCCGTGGT GCTGCTTACC TGGCTGCTGC TCAACCGTAC CCGGTTGGGT
CTGAACGTGC GCGCAGTCAC CCAGAACCGC AACATGGCCG CCTGCTGCGG CGTGTCCACC
GGGCGCGTCG ACATGCTCGC CTTTGGCCTT GGCTCGGGCA TCGCAGGGCT CGGTGGCGTG
GCTTTAAGCC AGGTGGGCAA CGTCGGCCCG GACCTGGGCC AGAGCTACAT CATCGATTCG
TTCCTGGTGG TGGTGCTCGG CGGCGTCGGG CAGCTGGCCG GTAGCCTCTG GGCCGCGTTC
GGCCTGGGCA TCGCCAACAA GCTGCTGGAG CCGCAGATCG GTGCCGTACT CGGCAAGATC
CTCATCCTTG CGTTGATCAT TCTGTTCATC CAGAAACGCC CGCAAGGCCT GTTCGCCCTC
AAGGGACGGG TAATCGACTG A
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| Protein sequence | MRLLGETGDP LARTRLEALL QPDAELDPGV RTAAETSLAQ VKRKLLLGEL LGQAFSGLSL
GSVLLLAALG LAITFGLLGV INMAHGEMLM LGAYSTYMVQ VLLQRFAPGA IEFYPLIALP
VAFAVSAGVG MALERTVIRH LYGRPLETLL ATWGISLILI QAIRLLFGAQ NVEVSNPAWL
SGGIQLLPNL VLPYNRLVII GFALAVVLLT WLLLNRTRLG LNVRAVTQNR NMAACCGVST
GRVDMLAFGL GSGIAGLGGV ALSQVGNVGP DLGQSYIIDS FLVVVLGGVG QLAGSLWAAF
GLGIANKLLE PQIGAVLGKI LILALIILFI QKRPQGLFAL KGRVID
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