| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4769 |
|---|
| Symbol | |
|---|
| ID | 1042932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5429837 |
|---|
| End bp | 5430316 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637148171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746875 |
|---|
| Protein GI | 26991450 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.40399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00938493 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGA TCGCGCTGTT CGCCGATGTG CAGAACCTCT ACTACACCGT GCGCCAGGCC
CACGGCTGCC ATTTCAACTA CACCGCCCTG TGGGCCGATG TCAGCCGCGA AGGCCAGATC
GTCGAGGCCG TGGCCTATGC CATCGATCGT GGCGACAGCA AACAACAGCA GTTCCAGCAG
ATCTTGCGCA ACCTCGGTTT CGAGGTGCGC CTCAAACCGT TCATCCAGCG CAGTGATGGC
TCGGCCAAAG GTGACTGGGA TGTGGGCATT ACCCTGGATG TGATCGACGC GGCCAGCCGG
GTCGACCAGG TGGTGCTGGC CTCCGGCGAC GGTGATTTCG ACTTGCTGCT GGAGCGGGTA
ATCCAGCGCC ATGGCACCGA AGCGGTGGTG TATGGCGTGC CGGGGCTGAC GGCGTTGTCA
CTGATCCGTG CTGCCACCCG CTACGTGCCC ATCGAAGGCG CGCTGTTGCT CAAACACTAA
|
|---|
| Protein sequence | MKKIALFADV QNLYYTVRQA HGCHFNYTAL WADVSREGQI VEAVAYAIDR GDSKQQQFQQ
ILRNLGFEVR LKPFIQRSDG SAKGDWDVGI TLDVIDAASR VDQVVLASGD GDFDLLLERV
IQRHGTEAVV YGVPGLTALS LIRAATRYVP IEGALLLKH
|
|---|
| |