| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4758 |
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| Symbol | |
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| ID | 1041916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5417701 |
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| End bp | 5419068 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148160 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_746864 |
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| Protein GI | 26991439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0040398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00284815 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGAGATC CGCAAGTGAA CGACACCCTC GCTCCGTCTG CCCGGCATGA AGGCGACGCG
TTGGCCAGTG CCGTGGCCAA GGTCAAGCGC CACGTCCTGC CGCTGTTCGT CATCATGTTC
ATCGTCAACT ACCTCGACCG CGTCAACATT GGCTTCGTCC GCCCGCACCT GGAAAGCGAC
CTGGGCATCA GCGCTGCGGC CTATGGCTTC GGTGCCGGGC TGTTCTTCAT CGGTTACGCG
CTGTTCGAAG TACCTTCGAA CATGCTGCTG CAAAAGGTCG GTGCCCGGCT GTGGCTGACC
CGTATCATGT TCACCTGGGG GCTGGTGGCC ACGGCCATGG CCTTTGTGCA GAACGAAACC
CAGTTCTACG TGCTGCGTTT TCTGCTCGGG GTGGCCGAAG CAGGCTTCTT TCCTGGCGTG
ATCTACTATT TCACCCGTTG GCTACCGGCG GCAGAGCGCG GCAAGGCGAT TGCCATCTTC
CTCAGTGGCT CGGCGCTGGC TTCGTTGATT TCCGGGCCGC TGGCCGGGGC GTTGATGCAG
ATCCAGGGCC TGGGCCTGCA TGGCTGGCAG TGGATGCTGT TCATTGAAGG CATGGCCTCG
GTGGCGCTGT GCTTCTTTGT GTTCTTCTGG CTCGACTCGA AGCCGCAGGA CGCCAAGTGG
CTGAGTAAGG CCGAGCAGGA CGCGCTGGTC GCCACCATCG ACCGCGAGCA GCAAGCGCGT
GAGGCCATCG GCGCGGTCAG GCCGTCGGCC TGGAACCTGC TCAAGGACCG CCAGATCGTG
CTGTTCTGCC TGATCTACTT CTGCATCCAG CTGACCATCT ATGCCGCCAC CTTCTGGCTG
CCCAGCATCA TCAAGCGTAT GGGCGACCTC AGTGACATGC AGGTCGGTTT CTTCAACTCG
ATCCCTTGGC TGATCTCGAT CCTGGCCATG TACGCCTTCG CCGCCGGTTC CGCTCGCTGG
AAGTTCCAGC AGGCCTGGGT GGCCGGCGCC CTGCTGGTCG CTGCCACGGG CATGTTCATG
TCCACCACGG GTGGGCCGGT GTTTGCCTTC GTCGCCGTGT GCTTCGCCGC GATCGGCTTC
AAGTCAGCGT CGTCACTGTT CTGGCCAATC CCCCAGGGCT ATCTGGACGC CCGCATCGCT
GCGGCGGTGA TTGCCCTGAT CAACTCGGTC GGCAACCTCG GCGGTTTCGT TGCCCCCACC
ACCTTCGGCT TGCTGGAGCA GCAGACTGGC TCGATCCAGG GCGGGCTGTA CGGCCTGGCG
GTGACCTCGG TGCTGGCGGC GATTGCCATC TTCTTCGTAC GCACTCGCCC CAAGGGCGCC
CCTTCCGATG ACCTCAAGGC CCCTTCGGCC CTGGGCCAGA CCCACTGA
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| Protein sequence | MGDPQVNDTL APSARHEGDA LASAVAKVKR HVLPLFVIMF IVNYLDRVNI GFVRPHLESD
LGISAAAYGF GAGLFFIGYA LFEVPSNMLL QKVGARLWLT RIMFTWGLVA TAMAFVQNET
QFYVLRFLLG VAEAGFFPGV IYYFTRWLPA AERGKAIAIF LSGSALASLI SGPLAGALMQ
IQGLGLHGWQ WMLFIEGMAS VALCFFVFFW LDSKPQDAKW LSKAEQDALV ATIDREQQAR
EAIGAVRPSA WNLLKDRQIV LFCLIYFCIQ LTIYAATFWL PSIIKRMGDL SDMQVGFFNS
IPWLISILAM YAFAAGSARW KFQQAWVAGA LLVAATGMFM STTGGPVFAF VAVCFAAIGF
KSASSLFWPI PQGYLDARIA AAVIALINSV GNLGGFVAPT TFGLLEQQTG SIQGGLYGLA
VTSVLAAIAI FFVRTRPKGA PSDDLKAPSA LGQTH
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