Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4674 |
Symbol | recC |
ID | 1045224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5303767 |
End bp | 5307249 |
Gene Length | 3483 bp |
Protein Length | 1160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148072 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | NP_746783 |
Protein GI | 26991358 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0516374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACA CCGCCCATCT CCACCCTGGC TTCATGATCG TCCACGGCAA CCGCCTCGAC GACCTGCGTA GCCTGGTAGT GAGCTGGATG CGTCGCTACC CGCTGGCGCC TCTGGAAAAC GAAATTGCCC TGGTGCAAAG CAATGGCATT GCCCAATGGC TCAAGCTGGC CCTGGCTGAA GATCCGCTGG AAGATGACCA AGGCGGCTGC GGCATCGCCG CTGCAATCGA TGTGCAACTG CCCGGTAGCT TTATGTGGCA GCTCTACCGC AGCGTGCTTG GCCGTAGCGA AATCCCCGAA GTGTCTCTGC TCGACAAGGC ACCCCTGACC TGGCGCCTGA TGCGCCTGTT GCCAGCGCTC ATCGAGCGCC CGCATTTCGA GCCACTGCGG CGCTTCCTCA CCGATGACAG TGACTTGCGC AAGCGCTACC AGCTCGCCGA GCGCTTGGCC GACCTGTTCG ACCAGTATCA GGTCTACCGC GCCGATTGGC TCAAGGACTG GGCCACTGGT GAGCACGTCA TCAACACGGC CCGCGGCGAG CGCAAAGTTC TGCCGCCAGG CAACCGCTGG CAAGCCGAGT TGTGGCGAGC ATTGCTGGAG GATGTTGGCG AGCAAGGCAT GGCGCAAAGC CGCGCCGGGG TACACCAACG TTTCATCGAG CGCATCAACA GCCTGGAGCA GGCGCCTGCA GGGCTGCCAC CGAGGGTGAT CGTGTTCGGT ATCTCTTCGC TGCCGGCCCA GGCCCTGGAA GCACTGGCAG GCCTGTCGCG TTTCAGTCAG GTATTGCTGT GCGTACACAA CCCATGCCGC CACCACTGGG CCGATATCGT TGCCGACAAG GACCTGTTGC GCCACCAGTA CAAACGCCAG CAACGCAAGC AAGGCATGCC CCTGCAACTG GACGACCAGA CGCTGCACCA GCATGCCCAC CCGTTGCTGG CAGCCTGGGG TAAACAAGGC CGCGACTACA TCAACCTGCT CGACAGCTAT GATGACCCAG GCAGCTACCA GGGCGTGTTC AGCGACGGCC GCATCGACCT GTTCAGCGAC GGTTCGCCCA CCACGCTGCT CAACGAACTG CAGGACGACA TCCTGGAATT GCGCCCGCTC GCCGAGAGCC GCGAACGGTG GCCGGCAGTC GACACCACAA AAGACCGCTC GATCCGCTTC CATATCGCGC ACAGCCCGCA ACGTGAAGTG GAGATCCTCC ACGACCAGCT GTTGGCCCGC TTCAGCGCCG ACCCGACTTT GCGCCCGCGC GACGTGATCG TCATGCTGCC GGACATCGAC ACTTACGCGC CGCATATCCG CGCCGTCTTC GGCCAGTTGC AGCGTAACGA TCCACGCTAC ATCCCGTTCA CCCTGACAGA CCAGGGCCAG CGTGGTCGCG AGCCTTTGCT GATCGCGCTT GAGCACCTGC TCAAACTGCC TGACAGCCGC TTCGCGGTCA GCGAAGTGCT CGACCTGCTG GACGTGCCGG CAGTCCGCGC CCGCTTCGGC ATCCGCGAAA ACGACCTGCC CACGCTGCAC CGCTGGATCG AGGGCGCTGG CATCCGTTGG GGCCTTGACG CCGCGCAGCG GGCGAGCCTG GGCTTGCCCG CCGGGCTCGA ACAGAACAGT TGGCGTTTCG GCCTGCGCCG CATGCTGTTG GGTTATGCCG TGGGGGTGGG TGAGGCCTGT GATGGCATTG AACCCTACGA TGAAATCGGT GGCCTGGACG CGGCACTGAT CGGCCCGCTG GTCGCGTTGC TGGATGCGCT CGAAGTCGCC TGCCAGGCCT TGTCCGAGCC TGCCACCGTC AGCCAGTGGG GCGAGCGACT GCATGCCTTG CTGCACGTGT TCTTCCTCGC CGAGGACGAG GGTGATGAGT TCCTGTTGAT GCAGTTGCAG GATTTGCGTG ATAGCTGGCT TGAGGTGTGC GAGACCGTCG GCCTGCACGA CCCGCTACCG CTTACCGTGG TGCGTGAAGC CTGGCTGTCG GGCCTCGATC AGGGCAAGCT GTCACAACGT TTCCTCGCCG GCTCGGTCAA CTTCTGCACA CTCATGCCCA TGCGCGCGAT CCCCTTCAGA GTGGTCTGCC TGCTGGGCAT GAACGATGGC GATTACCCGC GTGCGCAGCC ACCGCTGGAC TTCGACCTGA TGGCCAGCGA CTATCGCCCC GGCGACCGCT CACGCCGCGA AGACGACCGT TACCTGTTAC TTGAAGCGCT ACTGTCAGCA CGTGACCAAC TGTATGTCAG CTGGGTCGGG CGCAGTATCC GCGACAATAG CGAACGCCCG GCCTCGGTGC TGATCGGCCA GTTGCGCGAT CACATCGCTG CGGGCTGGCA TTTGGCCGAC GCGCAGCAGG GCCAGCCCGC GAGACCGGGC GAGCAACTGT TGCACGCACT GACCCAGGAG CACCCGCTGC AGCCGTTCAG CCCTCGGTAC TTCCAGAAGG GCAGCCCACT GTTCAGCTAT GCCCATGAAT GGCAGGTGCT GCACCAGCAG GGTGAGACAG ACGCGCAGAG CGAGCCGGGC TTGCCGCCTT ATCAGGACGC TGAAGCCCTG AGTCTGCACC AGCTGAATGA CTTCTTGCGC CACCCGGTAC GGCACTTCTT CAGCCAGCGC TTGAAGGTGT ACTTTGAGGC GCTGGAAGCG CCGACCCCGG ACGAAGAGCC CTTCGTCCTC GATACCCTGC AACGCTACGG CGCCAGTGAA AGCCTGCTTG GCGCCGCCTT GGCCGAACCG GACAACGCCG AACAAGCCTT GCGCGCCCAG GCCCGACGCC TGCAGGCCTG CGGTCTGCTG CCGCTAGCCG GTTTCGGCGA ACTGCTGCAA AACGAGTTGA TCGAACCGCT GCCGGACCTG CTGCAACGTC ACCAGCAATT GCTGCAACGC TGGCCACAGC TGGTCGAGGG CGCTTTGCCG GTGCATTTCG AGCACGGTCA GCACCGTCTG GAGGGCTGGC TGGGCCGGGT GTTCCAGGCG GAAGATCAGA GCCTTCTCAG TATCACCACA GTACCCAACA CCATCAGTGC CGGGCGCAAC AACCTGAAGT GGCACCGCCT TATCGCGCCC TGGGTTACGC ACCTGGCGGC CTGTGCGGCG GGCTACCCCT ATAACAGTGC ATTGGTAGCC AGTGACCTGA CCCTGTTGCT TGCACCCCTG CCGCAAGCGC AGGCCGCGCA ACTGCTGGGC GACCTGTTGG TGGCCCGTCA GGCGGCAATG AACGCGCCGT TGCCAGTCGC GGCCAAGACC GCGTTCGCCT GGTTGGCCCA GGACGATGCG GATAAAGCCC TGGCCGCAGC AGCTCGCGCC TACGAAGGCG ACGAACGCAC CAGCTTTGGC GAACGGAGTG AAAGCATTGC CTTGGCCCGC CAGTTCCGGG ACTTTGCAGC ACTCACCGCT GACGAAACGT TTGAAGGCTG GTGCGAAACC TTGTATCGCC CGTTGTTTAC CGCCCCTTGG CAGACCTTGG GCAACCCGGA GAAAGGCGCA TGA
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Protein sequence | MLNTAHLHPG FMIVHGNRLD DLRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE DPLEDDQGGC GIAAAIDVQL PGSFMWQLYR SVLGRSEIPE VSLLDKAPLT WRLMRLLPAL IERPHFEPLR RFLTDDSDLR KRYQLAERLA DLFDQYQVYR ADWLKDWATG EHVINTARGE RKVLPPGNRW QAELWRALLE DVGEQGMAQS RAGVHQRFIE RINSLEQAPA GLPPRVIVFG ISSLPAQALE ALAGLSRFSQ VLLCVHNPCR HHWADIVADK DLLRHQYKRQ QRKQGMPLQL DDQTLHQHAH PLLAAWGKQG RDYINLLDSY DDPGSYQGVF SDGRIDLFSD GSPTTLLNEL QDDILELRPL AESRERWPAV DTTKDRSIRF HIAHSPQREV EILHDQLLAR FSADPTLRPR DVIVMLPDID TYAPHIRAVF GQLQRNDPRY IPFTLTDQGQ RGREPLLIAL EHLLKLPDSR FAVSEVLDLL DVPAVRARFG IRENDLPTLH RWIEGAGIRW GLDAAQRASL GLPAGLEQNS WRFGLRRMLL GYAVGVGEAC DGIEPYDEIG GLDAALIGPL VALLDALEVA CQALSEPATV SQWGERLHAL LHVFFLAEDE GDEFLLMQLQ DLRDSWLEVC ETVGLHDPLP LTVVREAWLS GLDQGKLSQR FLAGSVNFCT LMPMRAIPFR VVCLLGMNDG DYPRAQPPLD FDLMASDYRP GDRSRREDDR YLLLEALLSA RDQLYVSWVG RSIRDNSERP ASVLIGQLRD HIAAGWHLAD AQQGQPARPG EQLLHALTQE HPLQPFSPRY FQKGSPLFSY AHEWQVLHQQ GETDAQSEPG LPPYQDAEAL SLHQLNDFLR HPVRHFFSQR LKVYFEALEA PTPDEEPFVL DTLQRYGASE SLLGAALAEP DNAEQALRAQ ARRLQACGLL PLAGFGELLQ NELIEPLPDL LQRHQQLLQR WPQLVEGALP VHFEHGQHRL EGWLGRVFQA EDQSLLSITT VPNTISAGRN NLKWHRLIAP WVTHLAACAA GYPYNSALVA SDLTLLLAPL PQAQAAQLLG DLLVARQAAM NAPLPVAAKT AFAWLAQDDA DKALAAAARA YEGDERTSFG ERSESIALAR QFRDFAALTA DETFEGWCET LYRPLFTAPW QTLGNPEKGA
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