Gene PP_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4674 
SymbolrecC 
ID1045224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5303767 
End bp5307249 
Gene Length3483 bp 
Protein Length1160 aa 
Translation table11 
GC content64% 
IMG OID637148072 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionNP_746783 
Protein GI26991358 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0516374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA CCGCCCATCT CCACCCTGGC TTCATGATCG TCCACGGCAA CCGCCTCGAC 
GACCTGCGTA GCCTGGTAGT GAGCTGGATG CGTCGCTACC CGCTGGCGCC TCTGGAAAAC
GAAATTGCCC TGGTGCAAAG CAATGGCATT GCCCAATGGC TCAAGCTGGC CCTGGCTGAA
GATCCGCTGG AAGATGACCA AGGCGGCTGC GGCATCGCCG CTGCAATCGA TGTGCAACTG
CCCGGTAGCT TTATGTGGCA GCTCTACCGC AGCGTGCTTG GCCGTAGCGA AATCCCCGAA
GTGTCTCTGC TCGACAAGGC ACCCCTGACC TGGCGCCTGA TGCGCCTGTT GCCAGCGCTC
ATCGAGCGCC CGCATTTCGA GCCACTGCGG CGCTTCCTCA CCGATGACAG TGACTTGCGC
AAGCGCTACC AGCTCGCCGA GCGCTTGGCC GACCTGTTCG ACCAGTATCA GGTCTACCGC
GCCGATTGGC TCAAGGACTG GGCCACTGGT GAGCACGTCA TCAACACGGC CCGCGGCGAG
CGCAAAGTTC TGCCGCCAGG CAACCGCTGG CAAGCCGAGT TGTGGCGAGC ATTGCTGGAG
GATGTTGGCG AGCAAGGCAT GGCGCAAAGC CGCGCCGGGG TACACCAACG TTTCATCGAG
CGCATCAACA GCCTGGAGCA GGCGCCTGCA GGGCTGCCAC CGAGGGTGAT CGTGTTCGGT
ATCTCTTCGC TGCCGGCCCA GGCCCTGGAA GCACTGGCAG GCCTGTCGCG TTTCAGTCAG
GTATTGCTGT GCGTACACAA CCCATGCCGC CACCACTGGG CCGATATCGT TGCCGACAAG
GACCTGTTGC GCCACCAGTA CAAACGCCAG CAACGCAAGC AAGGCATGCC CCTGCAACTG
GACGACCAGA CGCTGCACCA GCATGCCCAC CCGTTGCTGG CAGCCTGGGG TAAACAAGGC
CGCGACTACA TCAACCTGCT CGACAGCTAT GATGACCCAG GCAGCTACCA GGGCGTGTTC
AGCGACGGCC GCATCGACCT GTTCAGCGAC GGTTCGCCCA CCACGCTGCT CAACGAACTG
CAGGACGACA TCCTGGAATT GCGCCCGCTC GCCGAGAGCC GCGAACGGTG GCCGGCAGTC
GACACCACAA AAGACCGCTC GATCCGCTTC CATATCGCGC ACAGCCCGCA ACGTGAAGTG
GAGATCCTCC ACGACCAGCT GTTGGCCCGC TTCAGCGCCG ACCCGACTTT GCGCCCGCGC
GACGTGATCG TCATGCTGCC GGACATCGAC ACTTACGCGC CGCATATCCG CGCCGTCTTC
GGCCAGTTGC AGCGTAACGA TCCACGCTAC ATCCCGTTCA CCCTGACAGA CCAGGGCCAG
CGTGGTCGCG AGCCTTTGCT GATCGCGCTT GAGCACCTGC TCAAACTGCC TGACAGCCGC
TTCGCGGTCA GCGAAGTGCT CGACCTGCTG GACGTGCCGG CAGTCCGCGC CCGCTTCGGC
ATCCGCGAAA ACGACCTGCC CACGCTGCAC CGCTGGATCG AGGGCGCTGG CATCCGTTGG
GGCCTTGACG CCGCGCAGCG GGCGAGCCTG GGCTTGCCCG CCGGGCTCGA ACAGAACAGT
TGGCGTTTCG GCCTGCGCCG CATGCTGTTG GGTTATGCCG TGGGGGTGGG TGAGGCCTGT
GATGGCATTG AACCCTACGA TGAAATCGGT GGCCTGGACG CGGCACTGAT CGGCCCGCTG
GTCGCGTTGC TGGATGCGCT CGAAGTCGCC TGCCAGGCCT TGTCCGAGCC TGCCACCGTC
AGCCAGTGGG GCGAGCGACT GCATGCCTTG CTGCACGTGT TCTTCCTCGC CGAGGACGAG
GGTGATGAGT TCCTGTTGAT GCAGTTGCAG GATTTGCGTG ATAGCTGGCT TGAGGTGTGC
GAGACCGTCG GCCTGCACGA CCCGCTACCG CTTACCGTGG TGCGTGAAGC CTGGCTGTCG
GGCCTCGATC AGGGCAAGCT GTCACAACGT TTCCTCGCCG GCTCGGTCAA CTTCTGCACA
CTCATGCCCA TGCGCGCGAT CCCCTTCAGA GTGGTCTGCC TGCTGGGCAT GAACGATGGC
GATTACCCGC GTGCGCAGCC ACCGCTGGAC TTCGACCTGA TGGCCAGCGA CTATCGCCCC
GGCGACCGCT CACGCCGCGA AGACGACCGT TACCTGTTAC TTGAAGCGCT ACTGTCAGCA
CGTGACCAAC TGTATGTCAG CTGGGTCGGG CGCAGTATCC GCGACAATAG CGAACGCCCG
GCCTCGGTGC TGATCGGCCA GTTGCGCGAT CACATCGCTG CGGGCTGGCA TTTGGCCGAC
GCGCAGCAGG GCCAGCCCGC GAGACCGGGC GAGCAACTGT TGCACGCACT GACCCAGGAG
CACCCGCTGC AGCCGTTCAG CCCTCGGTAC TTCCAGAAGG GCAGCCCACT GTTCAGCTAT
GCCCATGAAT GGCAGGTGCT GCACCAGCAG GGTGAGACAG ACGCGCAGAG CGAGCCGGGC
TTGCCGCCTT ATCAGGACGC TGAAGCCCTG AGTCTGCACC AGCTGAATGA CTTCTTGCGC
CACCCGGTAC GGCACTTCTT CAGCCAGCGC TTGAAGGTGT ACTTTGAGGC GCTGGAAGCG
CCGACCCCGG ACGAAGAGCC CTTCGTCCTC GATACCCTGC AACGCTACGG CGCCAGTGAA
AGCCTGCTTG GCGCCGCCTT GGCCGAACCG GACAACGCCG AACAAGCCTT GCGCGCCCAG
GCCCGACGCC TGCAGGCCTG CGGTCTGCTG CCGCTAGCCG GTTTCGGCGA ACTGCTGCAA
AACGAGTTGA TCGAACCGCT GCCGGACCTG CTGCAACGTC ACCAGCAATT GCTGCAACGC
TGGCCACAGC TGGTCGAGGG CGCTTTGCCG GTGCATTTCG AGCACGGTCA GCACCGTCTG
GAGGGCTGGC TGGGCCGGGT GTTCCAGGCG GAAGATCAGA GCCTTCTCAG TATCACCACA
GTACCCAACA CCATCAGTGC CGGGCGCAAC AACCTGAAGT GGCACCGCCT TATCGCGCCC
TGGGTTACGC ACCTGGCGGC CTGTGCGGCG GGCTACCCCT ATAACAGTGC ATTGGTAGCC
AGTGACCTGA CCCTGTTGCT TGCACCCCTG CCGCAAGCGC AGGCCGCGCA ACTGCTGGGC
GACCTGTTGG TGGCCCGTCA GGCGGCAATG AACGCGCCGT TGCCAGTCGC GGCCAAGACC
GCGTTCGCCT GGTTGGCCCA GGACGATGCG GATAAAGCCC TGGCCGCAGC AGCTCGCGCC
TACGAAGGCG ACGAACGCAC CAGCTTTGGC GAACGGAGTG AAAGCATTGC CTTGGCCCGC
CAGTTCCGGG ACTTTGCAGC ACTCACCGCT GACGAAACGT TTGAAGGCTG GTGCGAAACC
TTGTATCGCC CGTTGTTTAC CGCCCCTTGG CAGACCTTGG GCAACCCGGA GAAAGGCGCA
TGA
 
Protein sequence
MLNTAHLHPG FMIVHGNRLD DLRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE 
DPLEDDQGGC GIAAAIDVQL PGSFMWQLYR SVLGRSEIPE VSLLDKAPLT WRLMRLLPAL
IERPHFEPLR RFLTDDSDLR KRYQLAERLA DLFDQYQVYR ADWLKDWATG EHVINTARGE
RKVLPPGNRW QAELWRALLE DVGEQGMAQS RAGVHQRFIE RINSLEQAPA GLPPRVIVFG
ISSLPAQALE ALAGLSRFSQ VLLCVHNPCR HHWADIVADK DLLRHQYKRQ QRKQGMPLQL
DDQTLHQHAH PLLAAWGKQG RDYINLLDSY DDPGSYQGVF SDGRIDLFSD GSPTTLLNEL
QDDILELRPL AESRERWPAV DTTKDRSIRF HIAHSPQREV EILHDQLLAR FSADPTLRPR
DVIVMLPDID TYAPHIRAVF GQLQRNDPRY IPFTLTDQGQ RGREPLLIAL EHLLKLPDSR
FAVSEVLDLL DVPAVRARFG IRENDLPTLH RWIEGAGIRW GLDAAQRASL GLPAGLEQNS
WRFGLRRMLL GYAVGVGEAC DGIEPYDEIG GLDAALIGPL VALLDALEVA CQALSEPATV
SQWGERLHAL LHVFFLAEDE GDEFLLMQLQ DLRDSWLEVC ETVGLHDPLP LTVVREAWLS
GLDQGKLSQR FLAGSVNFCT LMPMRAIPFR VVCLLGMNDG DYPRAQPPLD FDLMASDYRP
GDRSRREDDR YLLLEALLSA RDQLYVSWVG RSIRDNSERP ASVLIGQLRD HIAAGWHLAD
AQQGQPARPG EQLLHALTQE HPLQPFSPRY FQKGSPLFSY AHEWQVLHQQ GETDAQSEPG
LPPYQDAEAL SLHQLNDFLR HPVRHFFSQR LKVYFEALEA PTPDEEPFVL DTLQRYGASE
SLLGAALAEP DNAEQALRAQ ARRLQACGLL PLAGFGELLQ NELIEPLPDL LQRHQQLLQR
WPQLVEGALP VHFEHGQHRL EGWLGRVFQA EDQSLLSITT VPNTISAGRN NLKWHRLIAP
WVTHLAACAA GYPYNSALVA SDLTLLLAPL PQAQAAQLLG DLLVARQAAM NAPLPVAAKT
AFAWLAQDDA DKALAAAARA YEGDERTSFG ERSESIALAR QFRDFAALTA DETFEGWCET
LYRPLFTAPW QTLGNPEKGA