Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4535 |
Symbol | |
ID | 1046244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5149460 |
End bp | 5151463 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637147934 |
Product | hypothetical protein |
Protein accession | NP_746645 |
Protein GI | 26991220 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTGTT ACGTAAACTA CCTCGGGGTC GTAGACAAGG ATAATGGCGT TCACCATGTA CCTCTTGCTC CAGGCCTCAA CATCATCACT GGCAAGTCCT CGAAGGGTAA GAGCGCCATC CTCGATATCT TCGATTACTG CCTCGGCAGC TCGGAGGACA CGATCCCTGA GGGCATCATC ACGGATCGCG CCAAGTACTT CTTCACCGTG CTGCGCTTTG CGACCATGGC GGTTGTTGTA GGGCGGGCAG CGGCCAGCAA TCGGTGCTTC CTACGTGAGG TTTCCGGGCC TGCGGTGGAC AACGTGCTGC CTCTGATTGA GGATGTTGAC ACCTTTTTTG CCTCGAATTT CTTCCAGCCC AAGGCCGATT TTCTGAAGAG CCTGGGTCGT TACTTTGGTG TCACCCTGGA GAACATCGAC ACCGATCCTC TGCAGCAGGA GATGACTGGC AAATGGAGTG CAACGCCCTC TGTTCGCAGT TTCCCATCCT TCATGCTGCA GCATCAGAAC CTGGTGGCCA ACCGGCATGC GGTCTTCTAC CGCTTTGAAG AAAAGCGCAA ACGCGACCAA GCCATCGATC ACTTCAAGAT CTTCATGGAC ATCGTTGGTG AGGACTACTT CGACCTTGCG AAGCTGCGCA CTGAGGCCCT GTACGAACTC AAACGTGCCA AGGCGCAGAT TCCGAAGCAG GACAAGATCA GGGATGACTA CATCACCGAA TTCGACACTC TGCTGAAGGA GTATGAAGCT TTAGCCGGTT TGCCGCTGAC GGAGCTCACC CCTGCGGAGA TCTGGACAAA ACCCAAGCCT GCACTGGAGC GTCTCACGGG CATTTCGGTC AGGGTCGATG GTCTGTCCAA CGCTTTCGAG ACCCGCAGAA ACGAGCTACG CGACCGCAAA GCCGAGTTGA TGGCCAGCAT TCAGAAAGCG CTCAACACCC GTTATCTGCT GAAAGTCTCC ACCGAACAGG CGACCGGCTT TGCCAACTCG GTCACCGCGC TGCCTATCCC GAAATCTGCC AACCTTGAAC ACGCGGTCTG CCCCGTTTGC GCCTCGCAAT CGGATGTGGC TGAGGATGAA GCGAACAAAC TGTCGGCAGC AATCCACTGG CTGAACGACG AGCTCAAAGT TTCCACTTAC GCGCGTGAAG GCTTTGGCGA GGAGCGCCGG GCGGTGGACG CTGATCTCAA AAAGCTTCGC AAGGAATTGG CACAGGTTGA GCAGGCACTG AAGCCGCTTG ATCAGGAAGC AGACCGGCTT GAGAAGTCCA AGTCCGTGGA TGGTGCTGCG CAGAAGGCCA AGATCAAGTT GGAGCTTGCC ATTGAGAAGC GGATCGCTAA CCCACCGTCA GAAGCCAAGG GGGTGGTCGA CTTCTGGGAA AAGGAGGTTG AAAAGTACGA TCTTCAGATG GCCCAGTACG ATGTCGAGTC CAAGCTTTGG GCGTTGGGGA ACGACATCAA CCAGGCAATG AAGGCGTTTG GCAAGCATTT CGACTTCGAA GAGACGTACA AAAATGGCTC TTTGAAATTT GATGTCGATA CCTTCGATCT TTGGCATGAG AAGCCCATTG CTGGGGGACA TGTGAAAAAG GTGTTTCTGC GCTCGATGGG CAGCGGTGCC AACTGGCTGT ACTCCCACCT GACGCTCTTC ATGGCACTGC ATTACCAGTT CGCCGCACAT CCCAAGTGTA AGGTGCCGCC GATCCTTTTC TTGGATCAGC CGACCCAGGT CTACTTCCCT TCTACTGACA ACGCTGAAGC CTTCAAAGCC GACGAGCTAC GTGGGGATCG GAAGACTACC AAGACGGTCG ACGAAGACGT GGACGCGGTT TCGAAGATGT TCACTACCCT GGCCAAGTTT TGCGACACGA CGTTCAAGGA AACCGGCGTC AAGCCGCAAA TCATTGTCTG CGATCACGCG GATGGCCTGC CGTTGCAGGG CAACTATGTC TTCGAGGACT TCGTCCGCGC TCGGTGGAGA ACGCGCGGTC TGATTGCCGA GTAA
|
Protein sequence | MKCYVNYLGV VDKDNGVHHV PLAPGLNIIT GKSSKGKSAI LDIFDYCLGS SEDTIPEGII TDRAKYFFTV LRFATMAVVV GRAAASNRCF LREVSGPAVD NVLPLIEDVD TFFASNFFQP KADFLKSLGR YFGVTLENID TDPLQQEMTG KWSATPSVRS FPSFMLQHQN LVANRHAVFY RFEEKRKRDQ AIDHFKIFMD IVGEDYFDLA KLRTEALYEL KRAKAQIPKQ DKIRDDYITE FDTLLKEYEA LAGLPLTELT PAEIWTKPKP ALERLTGISV RVDGLSNAFE TRRNELRDRK AELMASIQKA LNTRYLLKVS TEQATGFANS VTALPIPKSA NLEHAVCPVC ASQSDVAEDE ANKLSAAIHW LNDELKVSTY AREGFGEERR AVDADLKKLR KELAQVEQAL KPLDQEADRL EKSKSVDGAA QKAKIKLELA IEKRIANPPS EAKGVVDFWE KEVEKYDLQM AQYDVESKLW ALGNDINQAM KAFGKHFDFE ETYKNGSLKF DVDTFDLWHE KPIAGGHVKK VFLRSMGSGA NWLYSHLTLF MALHYQFAAH PKCKVPPILF LDQPTQVYFP STDNAEAFKA DELRGDRKTT KTVDEDVDAV SKMFTTLAKF CDTTFKETGV KPQIIVCDHA DGLPLQGNYV FEDFVRARWR TRGLIAE
|
| |