| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4457 |
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| Symbol | |
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| ID | 1041902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5058123 |
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| End bp | 5059250 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637147850 |
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| Product | nopaline dehydrogenase, putative |
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| Protein accession | NP_746568 |
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| Protein GI | 26991143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000050216 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCCC AATTTGATGT GATCATCATT GGCGGGGGCA TGGTGGGGGC CGCGATTGGC
TACGGCCTCG CAGGTGGTAA GCGCCGTATT CTGATGCTGG ATGGAGCTGA CACCGATTAC
CGCGCCGCCA AGGCTAATTT TGGTCTGGTG TGGGCTCATG GCAAAGGGAT GCGCGACCCT
AACTATCAGC GCCTCTCCCT GAACGCAGCT AAGGCCTGGC CAAGTTTCGC TTCGCAGCTT
GAGGAAGAAA GCGGCATCTC GCTGGACTAC GAGCAGAAGG GGGGCTTGAA CTTCTGCCTC
AGTGACGATG AGTTCGATGC TCGGGCGAAG GCGATGGATG CCTGGAACAG GCAAACACCA
GAACTCGCTC CTTCAGCCCA CATGCTAGAT CGAGCTGAAC TGCTGCGTCG ATTTCCAACA
ATGAAGATTG GCAAGGCCGT TGTCGGTGCG AGTTTCGGCG AGTTCGATGG CCATGCGAAT
CCGCTTCGGT TGCTTGCCGC AATGCAAAAG GCCTTCATGG CTCGTGGCGG GCAGCTCCAG
AACAATCGCC CGGTCACGGA TATACGACGC CTATCTGGCG GGGGCTTTGA GGTTCAGTCA
GGCGAGTACC GCGCGCAGTG TGAGCGAATC GTCATTGCGG CTGGATTAGG GTGCGCAGCG
CTGGGGCCAA TGGTGGGTCT GAACGTGCCT ATCCGCCCGC AGCGGGGCCA GCTCCTGGTT
ACTGAGCGCC TTGCGCCGCT ACTTCCAATT CCCGGGAGCG GATTGCGGCA AACAGCGGAA
GGCACGGTGA TGATTGGCGT GACGCAGGAG GAGGTAGGTT TTGACCTCGC AACCACTACC
GAAGGCGCTG CGCGGATTAC TCGTAAGGCG TTGAAAATTC TTCCGGATCT TGCACAGGCC
AAATTAGTTC GCCAGTGGTC GTGTCTCCGG ATCATGACGC CCGATGGAAA TCCTGTGTAT
GCGAGGTCGT TGACCCACCC CGGTGCAGAG ATCGCCACAT GCCACTCGGG TGTGACTTTG
GCGTCCTTTC ACGCCAATGA GTACGCCAAA GCATTCGACG CAAAATCGAT CCCCGCTGAT
TTAGAGATTT TCCATTATGG ACGTTTCGAT CTTCAAAAAA CTTCCTGA
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| Protein sequence | MTAQFDVIII GGGMVGAAIG YGLAGGKRRI LMLDGADTDY RAAKANFGLV WAHGKGMRDP
NYQRLSLNAA KAWPSFASQL EEESGISLDY EQKGGLNFCL SDDEFDARAK AMDAWNRQTP
ELAPSAHMLD RAELLRRFPT MKIGKAVVGA SFGEFDGHAN PLRLLAAMQK AFMARGGQLQ
NNRPVTDIRR LSGGGFEVQS GEYRAQCERI VIAAGLGCAA LGPMVGLNVP IRPQRGQLLV
TERLAPLLPI PGSGLRQTAE GTVMIGVTQE EVGFDLATTT EGAARITRKA LKILPDLAQA
KLVRQWSCLR IMTPDGNPVY ARSLTHPGAE IATCHSGVTL ASFHANEYAK AFDAKSIPAD
LEIFHYGRFD LQKTS
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