| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4455 |
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| Symbol | |
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| ID | 1041835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5055383 |
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| End bp | 5056324 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637147848 |
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| Product | opine ABC transporter, periplasmic binding protein, putative |
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| Protein accession | NP_746566 |
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| Protein GI | 26991141 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000539356 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCAGT TTGCGATTAA GCGACTGATG CTCGCGATTC CGACCTTGCT GGCAATGTTG
ACCGCTGTCT TTGTACTCGT TCGTCTGGTA CCCGGTGACC CGGCTGCTGT CATTCTCGGT
GACCAGGCGA GTGCAGAGTC TTTGGCAGCC ATGCGCGAGC AACTGGGCCT AAATCAACCA
ATCGCGATGC AATATATCCA CTTCCTCGGC GACATGCTCT CAGGGAATTT CGGGGTCTCA
ATGACCAGCG GCAGAACTGT GCTGCAGGAG GTATCCCTGG TTCTACCGTG GACGCTGCAA
TTGACGTTTG CATCCGTGTT GATCGGCCTC GTGTTCGGTC TGCCCCTTGG TGTCTGGGCG
GCGCTTCGTC GCAACGCCTG GCCAGACTAC GTGGGCCGCA TTCTGTCGCT GACTGGGTTG
TCGTTCCCCG CGTTCGTGTC TGCCATGTTG ATGCTCCTGG TTTTCGCCAT CCATTTCCGG
TGGTTCCCCG TGATCGGAAG CTTGGTCGAC GGAGGTTTCC TCTCCCAACT CCATGCTCTC
ACACTGCCCG CATTGAACCT GGGTCTGATC ATGACGGCCT ATGTGATGCG CGTTACGCGC
TCCTCGATGA TCAGCGTGCT TGGTGAGGAC TACATCCGCA CGGCCAAAGC CAAAGGTGTT
CGTCCTATGC GATTGGTGTT GAGGCATGGG CTGCGTAATG CACTGATCCC GATTGTCACC
GTAGTAGGCC TGTATTTTGG GACGCTCATC GGCAACTCCG TCCTAACCGA AATCGTGTTT
AACCGCCCTG GTCTGGGGAA ATTGATTTTG GGTGCGCTCA ACACCCGAGA TTACACCCTG
CTCCAAGGGC TGATGGTCGT CTTCGCACTG TGTGTGATCG TCGTAAACAT CATCACCGAC
ATCGTTTATG GGTTGGTTGA TCCTCGGGTG AAAATCAAAT GA
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| Protein sequence | MIQFAIKRLM LAIPTLLAML TAVFVLVRLV PGDPAAVILG DQASAESLAA MREQLGLNQP
IAMQYIHFLG DMLSGNFGVS MTSGRTVLQE VSLVLPWTLQ LTFASVLIGL VFGLPLGVWA
ALRRNAWPDY VGRILSLTGL SFPAFVSAML MLLVFAIHFR WFPVIGSLVD GGFLSQLHAL
TLPALNLGLI MTAYVMRVTR SSMISVLGED YIRTAKAKGV RPMRLVLRHG LRNALIPIVT
VVGLYFGTLI GNSVLTEIVF NRPGLGKLIL GALNTRDYTL LQGLMVVFAL CVIVVNIITD
IVYGLVDPRV KIK
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