| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4454 |
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| Symbol | |
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| ID | 1045213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5054514 |
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| End bp | 5055386 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637147847 |
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| Product | opine ABC transporter, permease protein, putative |
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| Protein accession | NP_746565 |
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| Protein GI | 26991140 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000504442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTACTC TCACTGCACC ACTCGTATCC AAGCCCACGA CACTTTGGCA AGCCTTGTTT
CAGAATCGTC TTTCCTGGAT TGGGATTGGC CTTCTGGTGA TGATCGTCTT GGTCGCATTG
TTCGCACCAC TCATTGCGCC ATATGACCCA CTGCAGCAAA ACATCGCTTA TCGGTTGGAG
CCGCCGTCTG CTGAGTTTTG GCTGGGCACA GACACCTACG GTCGGGATGT GTTGTCTCGC
CTGATTTACG GAACTCGTGT GTCGCTGCTC GTTGGTTTTG TCGCCGTGAT GATCGCGATG
GTTGTTGGCT CTGCGCTCGG TGTGATCGCC GGGTATGTCG GGGGCATAAC TGACCGCCTG
ATCACTGGCT TTGTTGATGT GCTGCTGTCG TTTCCGACGC TGCTGCTTGG GCTCATGGTT
GCCGCCATGC TCGGCGCGAG TCTTGAAAAT CTCATCATCG CTATCGCCAT CACCGAGATC
GCACCTTTTG TTCGTATCGC CCGGGCTCCG ACCATAGCAC TCAAACAACG CGATTTCGTC
GAGGCTGGCC GTTCGTTGGG GTATGGCCCT GGTCGACTGA TGACTGTGCA TATCTTGCCC
AACATGATCT CGGAAGTTCT CGTACTCGGT GCTCTGTGGA TGGCGACGGC CATTCGCACA
GAAGCTTCGC TGAGCTTCAT CGGCTTGGGT GTCCCACCGC CCGCCCCGAC CTGGGGGAGC
ATGATCAGGG AAGGTTTTGA GAACATCTTG GACGCGTGGT GGCTCACGGT ATTCCCAAGC
CTCGCAATTC TGCTGACCGT GCTTGCGTTG AGCCTACTGG GTGACGCATT GCGTGATGCA
AACGATCCTA AGACTCGTTC GGAGCGCTCA TGA
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| Protein sequence | MTTLTAPLVS KPTTLWQALF QNRLSWIGIG LLVMIVLVAL FAPLIAPYDP LQQNIAYRLE
PPSAEFWLGT DTYGRDVLSR LIYGTRVSLL VGFVAVMIAM VVGSALGVIA GYVGGITDRL
ITGFVDVLLS FPTLLLGLMV AAMLGASLEN LIIAIAITEI APFVRIARAP TIALKQRDFV
EAGRSLGYGP GRLMTVHILP NMISEVLVLG ALWMATAIRT EASLSFIGLG VPPPAPTWGS
MIREGFENIL DAWWLTVFPS LAILLTVLAL SLLGDALRDA NDPKTRSERS
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