Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4397 |
Symbol | |
ID | 1043210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4987585 |
End bp | 4988328 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147793 |
Product | type IV pilus assembly PilZ |
Protein accession | NP_746511 |
Protein GI | 26991086 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.822283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTCAATG AATCCGATGC CCCGCAACCA CCCAAGGTGT TGAGCACCCC CTTGGAGATT GCGGCCAACT TGCGGCAGCT GCAGGAAAGC CACGACCCCC TGATCATCAC CTTCCACGAC CGCAGCCATC GCTTCCAGAG CTATGTGGTG CACGTGGACC GCGAAAGCAA CACCCTGGCA CTGGATGAGA TGATCCCCCG TGACGGCGAG AAATTCATCG AGAACGGCGA GCACTTCCGT GTCGAAGGCT TCCACGATGG TGTACGCATC GCCTGGGAAT GCGATCACGC GCTGAAAATC AGCGAAGTCG ACGGCCACCG CTGCTACAGC GGCCCCCTGC CGCAAGAGGT GACCTACCAC CAGCGCCGCA ACGCCTTCCG CGCCGCGCTG AAGCTATCGC AGCTGGTCGA CATCATCCTT GACGGTGCTC ACCTCAAGGG CAACGGCGCC ATGCGAGGCA AGCTGCTGGA TATCTCGGCC ACCGGCTGCA AACTGCGCTT CGAAGGCAAT GTCGAAGACC GCTTGCAACT GGGCCAGGTG TATGAGCGCT TCAAGGCGGG CAACCCACTG GGCCTGGTGG ACACCATGGT CGAGCTGCGT CATCTGCACT ATGAAGAGCG CATCAACACC ACCTTTGCCG GCGTGCGTTT CCACAACCTG AGCGGGCAGG CGCAGCGCAA GATCGAGAGT TTCGTGTACC AGCTGCAGCG TGAGGCGCGG CGGTTCGACA AGGACGATTA TTGA
|
Protein sequence | MFNESDAPQP PKVLSTPLEI AANLRQLQES HDPLIITFHD RSHRFQSYVV HVDRESNTLA LDEMIPRDGE KFIENGEHFR VEGFHDGVRI AWECDHALKI SEVDGHRCYS GPLPQEVTYH QRRNAFRAAL KLSQLVDIIL DGAHLKGNGA MRGKLLDISA TGCKLRFEGN VEDRLQLGQV YERFKAGNPL GLVDTMVELR HLHYEERINT TFAGVRFHNL SGQAQRKIES FVYQLQREAR RFDKDDY
|
| |