Gene PP_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4397 
Symbol 
ID1043210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4987585 
End bp4988328 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID637147793 
Producttype IV pilus assembly PilZ 
Protein accessionNP_746511 
Protein GI26991086 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.822283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAATG AATCCGATGC CCCGCAACCA CCCAAGGTGT TGAGCACCCC CTTGGAGATT 
GCGGCCAACT TGCGGCAGCT GCAGGAAAGC CACGACCCCC TGATCATCAC CTTCCACGAC
CGCAGCCATC GCTTCCAGAG CTATGTGGTG CACGTGGACC GCGAAAGCAA CACCCTGGCA
CTGGATGAGA TGATCCCCCG TGACGGCGAG AAATTCATCG AGAACGGCGA GCACTTCCGT
GTCGAAGGCT TCCACGATGG TGTACGCATC GCCTGGGAAT GCGATCACGC GCTGAAAATC
AGCGAAGTCG ACGGCCACCG CTGCTACAGC GGCCCCCTGC CGCAAGAGGT GACCTACCAC
CAGCGCCGCA ACGCCTTCCG CGCCGCGCTG AAGCTATCGC AGCTGGTCGA CATCATCCTT
GACGGTGCTC ACCTCAAGGG CAACGGCGCC ATGCGAGGCA AGCTGCTGGA TATCTCGGCC
ACCGGCTGCA AACTGCGCTT CGAAGGCAAT GTCGAAGACC GCTTGCAACT GGGCCAGGTG
TATGAGCGCT TCAAGGCGGG CAACCCACTG GGCCTGGTGG ACACCATGGT CGAGCTGCGT
CATCTGCACT ATGAAGAGCG CATCAACACC ACCTTTGCCG GCGTGCGTTT CCACAACCTG
AGCGGGCAGG CGCAGCGCAA GATCGAGAGT TTCGTGTACC AGCTGCAGCG TGAGGCGCGG
CGGTTCGACA AGGACGATTA TTGA
 
Protein sequence
MFNESDAPQP PKVLSTPLEI AANLRQLQES HDPLIITFHD RSHRFQSYVV HVDRESNTLA 
LDEMIPRDGE KFIENGEHFR VEGFHDGVRI AWECDHALKI SEVDGHRCYS GPLPQEVTYH
QRRNAFRAAL KLSQLVDIIL DGAHLKGNGA MRGKLLDISA TGCKLRFEGN VEDRLQLGQV
YERFKAGNPL GLVDTMVELR HLHYEERINT TFAGVRFHNL SGQAQRKIES FVYQLQREAR
RFDKDDY