Gene PP_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4232 
Symbol 
ID1042575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4803317 
End bp4804528 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID637147631 
Productgluconate 2-dehydrogenase acceptor subunit 
Protein accessionNP_746349 
Protein GI26990924 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCG TACGTAGCGC CTCGGCGTTG GCCCTCGGGC TGGCTGTCAG CTCGTTTGCC 
TTGGCGGCCG ACGATGCGCA GGTCAAGCGC GGTGAATACC TGGCCCGCGC GGCCGACTGC
ATGGCCTGCC ACACCGCCGA AGGCGGCGCG CCGTATGCGG GCGGCCTGCC GATCCATTCG
CCGTTCGGCA CCATTTATGG CAGCAATATC ACCCCGGACA AACAGTACGG CATCGGCAAC
TACAGCGCCG ACGAGTTCTT CGCCGCAGTC ACCGAGGGCA AGCGCAAGGA CGGCGCCAAC
CTTTATCCTG CGATGCCTTA CACCTCGTAC CACCTGATCA AGCGTGAAGA TTCGGACGCG
ATCCTCGCCT ACCTGATGAC CATACCGCCG ATCAACCGCC CGGCACCGCA GACCGCGCTG
CGCTTCCCGT TCAATGTGCG CATGGGGCTC AGCGGCTGGA ACATGCTATA TGGCAAGAGC
GTGCAACTGC AGCCGACCGA GGGCAAAAGC CCGGCCTGGC AGCGCGGCCA GTACATGGTC
GAGGTCTTGG GCCATTGTGG CGAATGCCAT ACCCCGCGCA ACCCGATCGG TGCGCTGCAG
CAGGACCAAC GCCTGAGCGG CGGCCTGCTG GGTGGCTACC TGGCGCCAAG CCTGCTGGCC
CAGGACCTGG CCGAGCGCGG CTGGACCCAG CCGGACCTGA CCACCTTCCT CAAGCACGGC
ATCAGCGCCC AGGGCAGCAT GTTCAACGAG ATGTTCCCGG TGGTGCACCA CAGCACCCAG
CACCTGGAAG ATGCAGACCT TGCGGCCATG GCCACCTACC TGCTGGGCGA CCAGCCGCCG
CCGGCCAAGG CTATCGAGTC CGTTGCCCTG GAGCAGATGA GCGACAGTGC CAAGCGGGGC
CACCAGCAGT ACCTAAATGT CTGCGCCGGC TGCCATGGGG TTGACGGTGA GGGCAAGCCG
CACATCGCCG TGGCCATGCG CGGCAACACC GTGCTGCGTC AGGCCGACTC GCGCAATCTG
GTCAAGGTGG TCCTCGAGGG CATCCGTGAA CAGCAGTTCA CCGGCTTCGA GCGCATGCAG
CCGATGCCGG GCTTTGCCGA CAAGCTTGAT GACCAACAGG TGATAGATAT GGTCAACTAC
TTGCGCCAGG CCTGGGGTGG ATTGCCCGGC GACCTGAACG TACAGCAGCT CGCCGAGCTG
AAGGCGGAGT AA
 
Protein sequence
MGFVRSASAL ALGLAVSSFA LAADDAQVKR GEYLARAADC MACHTAEGGA PYAGGLPIHS 
PFGTIYGSNI TPDKQYGIGN YSADEFFAAV TEGKRKDGAN LYPAMPYTSY HLIKREDSDA
ILAYLMTIPP INRPAPQTAL RFPFNVRMGL SGWNMLYGKS VQLQPTEGKS PAWQRGQYMV
EVLGHCGECH TPRNPIGALQ QDQRLSGGLL GGYLAPSLLA QDLAERGWTQ PDLTTFLKHG
ISAQGSMFNE MFPVVHHSTQ HLEDADLAAM ATYLLGDQPP PAKAIESVAL EQMSDSAKRG
HQQYLNVCAG CHGVDGEGKP HIAVAMRGNT VLRQADSRNL VKVVLEGIRE QQFTGFERMQ
PMPGFADKLD DQQVIDMVNY LRQAWGGLPG DLNVQQLAEL KAE