Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4224 |
Symbol | |
ID | 1042552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4796660 |
End bp | 4797982 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637147623 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_746341 |
Protein GI | 26990916 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.189228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC GGGTACGCCT GAGCCTGATC CTCGGCAGTG CCTTCGTGAT CATCTGGGCA CTGGCCGCCG CGTGGATGCT GCGAGACCTG CGCCAGCAGA TGATGTTCTC CCTCGACCAG CGCCTGGTGG CGTCGGCGCG TATGGTCGCC GGGCTGATCG ACCAACTGCC GCAGCCGCTG ACCGCCAAGG GCGGGGAGGC GCATTTTTCT GCCGACCAGT TCAGCGTACC GGATGGCATG GCCTGCCAGG TCAGCTCGCT GCGTGGCGAG ATCCTCGCCA GCAACCACAA GCACGATGGC GCCATGGACG ACGAGCGCAG CGGGTTTCGT GACCAGACCA TCGACGATGC GCTTTGGCGC ACCTTTACCT ACAACCACGG CGATGTGCGC ATCACCACGG CTGACCGGCA CATGGAGCGC GAGGCGCTGA ACCAGTCGAT TCTGCTGGCG GCATCGGCGC CGGTACTGAT GGCCCTGCTC GGCAGCCTGG GGCTGTTGTG GATCGGCCTT GGCAAGGGCC TGGAGCCGCT CAACCGCATG CGTGATGCGT TGCGCCGCAG GCGTGCGGAC AGTGTCGAGC CGCTGCAGGT GGCGGGCATG CCCAGCGAGT TGCAGCCGTT GCTGGAGACC CAGAACCAGC TGTTCCTGCG CATTGCCCAG ACCCTCGAGC GTGAGCGGCG CCTGACCGAC GATGCCGCGC ATGAACTGCG CAGCCCGCTG ACCGCGATCA AGACCCACCT GCAGGTGGCG CGCATGACCG ACGGTGCCGT GCGCGAGCAG GCGCTGGAGC ATGCCGAGCA GGGCACTGAC CGCATGCACC GCACGCTTGA GCAGTTGCTG ATGCTGGCGC GGGTAGAAGG CAGCCTGTCG TTCGAGGATG GCGTGCAGTG CAGCGCCGAG CAGGTGGCCC GTCAGGCGGT GCAGGATGCC GGCGGAGGCG ACAATCGGCG TATCCTGTTG CGTTTGCCAG AGGAGGCGAC GCAGATTTAC CTGGGGATGC CGGCACCGTT GGCGGTGGCA GCGCTGCGCA ACCTGCTGGA CAATGCCTTG CGCCATGGCG GCGATGAAGC CGTGGAGTTG GAGGTGCAGA TGGCGGACGG CCAGGTGGGC TTCATGGTGC GTGACCATGG GCCAGGCATT GCTGAGGCGG ACCTGGAGCA CCTGACCGAG CGCTTCTGGC GCAATGGGCA GAGTGGTGGT TGCGGTTTGG GGCTGGCGAT TGTGCAGGCG ATCGTGCAGC GGTGTGCCGG TAGCCTGCGC TTTGACAGCC GTAGTGACGG CTTGCGGGTT TTGTTGCAGG TACCGGCGCG TCCTGGGCAT TGA
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Protein sequence | MSLRVRLSLI LGSAFVIIWA LAAAWMLRDL RQQMMFSLDQ RLVASARMVA GLIDQLPQPL TAKGGEAHFS ADQFSVPDGM ACQVSSLRGE ILASNHKHDG AMDDERSGFR DQTIDDALWR TFTYNHGDVR ITTADRHMER EALNQSILLA ASAPVLMALL GSLGLLWIGL GKGLEPLNRM RDALRRRRAD SVEPLQVAGM PSELQPLLET QNQLFLRIAQ TLERERRLTD DAAHELRSPL TAIKTHLQVA RMTDGAVREQ ALEHAEQGTD RMHRTLEQLL MLARVEGSLS FEDGVQCSAE QVARQAVQDA GGGDNRRILL RLPEEATQIY LGMPAPLAVA ALRNLLDNAL RHGGDEAVEL EVQMADGQVG FMVRDHGPGI AEADLEHLTE RFWRNGQSGG CGLGLAIVQA IVQRCAGSLR FDSRSDGLRV LLQVPARPGH
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