Gene PP_4224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4224 
Symbol 
ID1042552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4796660 
End bp4797982 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content66% 
IMG OID637147623 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_746341 
Protein GI26990916 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC GGGTACGCCT GAGCCTGATC CTCGGCAGTG CCTTCGTGAT CATCTGGGCA 
CTGGCCGCCG CGTGGATGCT GCGAGACCTG CGCCAGCAGA TGATGTTCTC CCTCGACCAG
CGCCTGGTGG CGTCGGCGCG TATGGTCGCC GGGCTGATCG ACCAACTGCC GCAGCCGCTG
ACCGCCAAGG GCGGGGAGGC GCATTTTTCT GCCGACCAGT TCAGCGTACC GGATGGCATG
GCCTGCCAGG TCAGCTCGCT GCGTGGCGAG ATCCTCGCCA GCAACCACAA GCACGATGGC
GCCATGGACG ACGAGCGCAG CGGGTTTCGT GACCAGACCA TCGACGATGC GCTTTGGCGC
ACCTTTACCT ACAACCACGG CGATGTGCGC ATCACCACGG CTGACCGGCA CATGGAGCGC
GAGGCGCTGA ACCAGTCGAT TCTGCTGGCG GCATCGGCGC CGGTACTGAT GGCCCTGCTC
GGCAGCCTGG GGCTGTTGTG GATCGGCCTT GGCAAGGGCC TGGAGCCGCT CAACCGCATG
CGTGATGCGT TGCGCCGCAG GCGTGCGGAC AGTGTCGAGC CGCTGCAGGT GGCGGGCATG
CCCAGCGAGT TGCAGCCGTT GCTGGAGACC CAGAACCAGC TGTTCCTGCG CATTGCCCAG
ACCCTCGAGC GTGAGCGGCG CCTGACCGAC GATGCCGCGC ATGAACTGCG CAGCCCGCTG
ACCGCGATCA AGACCCACCT GCAGGTGGCG CGCATGACCG ACGGTGCCGT GCGCGAGCAG
GCGCTGGAGC ATGCCGAGCA GGGCACTGAC CGCATGCACC GCACGCTTGA GCAGTTGCTG
ATGCTGGCGC GGGTAGAAGG CAGCCTGTCG TTCGAGGATG GCGTGCAGTG CAGCGCCGAG
CAGGTGGCCC GTCAGGCGGT GCAGGATGCC GGCGGAGGCG ACAATCGGCG TATCCTGTTG
CGTTTGCCAG AGGAGGCGAC GCAGATTTAC CTGGGGATGC CGGCACCGTT GGCGGTGGCA
GCGCTGCGCA ACCTGCTGGA CAATGCCTTG CGCCATGGCG GCGATGAAGC CGTGGAGTTG
GAGGTGCAGA TGGCGGACGG CCAGGTGGGC TTCATGGTGC GTGACCATGG GCCAGGCATT
GCTGAGGCGG ACCTGGAGCA CCTGACCGAG CGCTTCTGGC GCAATGGGCA GAGTGGTGGT
TGCGGTTTGG GGCTGGCGAT TGTGCAGGCG ATCGTGCAGC GGTGTGCCGG TAGCCTGCGC
TTTGACAGCC GTAGTGACGG CTTGCGGGTT TTGTTGCAGG TACCGGCGCG TCCTGGGCAT
TGA
 
Protein sequence
MSLRVRLSLI LGSAFVIIWA LAAAWMLRDL RQQMMFSLDQ RLVASARMVA GLIDQLPQPL 
TAKGGEAHFS ADQFSVPDGM ACQVSSLRGE ILASNHKHDG AMDDERSGFR DQTIDDALWR
TFTYNHGDVR ITTADRHMER EALNQSILLA ASAPVLMALL GSLGLLWIGL GKGLEPLNRM
RDALRRRRAD SVEPLQVAGM PSELQPLLET QNQLFLRIAQ TLERERRLTD DAAHELRSPL
TAIKTHLQVA RMTDGAVREQ ALEHAEQGTD RMHRTLEQLL MLARVEGSLS FEDGVQCSAE
QVARQAVQDA GGGDNRRILL RLPEEATQIY LGMPAPLAVA ALRNLLDNAL RHGGDEAVEL
EVQMADGQVG FMVRDHGPGI AEADLEHLTE RFWRNGQSGG CGLGLAIVQA IVQRCAGSLR
FDSRSDGLRV LLQVPARPGH