Gene PP_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4200 
Symbol 
ID1042442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4745185 
End bp4746006 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID637147599 
Producthypothetical protein 
Protein accessionNP_746317 
Protein GI26990892 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC GCGGAACGGG CAGGGTGCTG GCATGTGTGG CGCTGTTGGT GTCACCACTG 
GCCATGGCCG CAGGCAAGTG CGAGCGCCTG GTGGCGACCG GTAGCCCAGA TGCGCCGCCC
TATTCGTGGC AAGACCCGAA AGACCCCGGG CACCTGATTG GCGCCAACGT CGACCTGTTG
CGCCAGGTGG CTGGCGAACT GGGTGTGAAG GTCGAGGTGC TGAGTGCCGG TCGCCGTGAT
CAGGCGCTGG AAGAGGTGCG CAGTGGGCGC ATGGACCTGC TGCTCGACAC CCCCTTGCAG
GTGGAGCAAC TGACCGCGCT GGACTACATC CATCCGCCGT TGCAGCTCAA TGAGTACCTG
GTGTGGACCC GCCATGATGC AGCGGTGACC TTTGATGGCC CGGCCGATCT GGCCAGATAC
CAGGGCAGTT TGTCCGAGCG TGCACGCCTG ACCCCGGCCT TTACTGCGTT CGCCAAGGCC
CAGCTCAAGC TGGTGCCGGC GCAAAACCTG ACCCAGGCCT TTCAGAAACT GGTACTCGGC
CAGGTGGACT ATGTGCTGGC TGGCCGTTAC TCCGGTATGG CCATGGCCCA GAGCCTCGGC
ATGAGCAATG ACCTCATAGC CCGCGGCTTG CCGGTGGACA GGCCGGGCCT GTACCTGGCG
CTGTCGCACA ACTCGGCGTG TAATGACAGC TGGTTGCGTG GGCAATTGGC AAAAAAACTG
ACAGAATTGC CGATCTCTGG TGCATCCGAA GCTGTGCTGC AACGAAATGT CGAGCGCTGG
AAAGCGCAGA TGCAGGTACC GGCGGACGCC CCCAAACACT AG
 
Protein sequence
MTLRGTGRVL ACVALLVSPL AMAAGKCERL VATGSPDAPP YSWQDPKDPG HLIGANVDLL 
RQVAGELGVK VEVLSAGRRD QALEEVRSGR MDLLLDTPLQ VEQLTALDYI HPPLQLNEYL
VWTRHDAAVT FDGPADLARY QGSLSERARL TPAFTAFAKA QLKLVPAQNL TQAFQKLVLG
QVDYVLAGRY SGMAMAQSLG MSNDLIARGL PVDRPGLYLA LSHNSACNDS WLRGQLAKKL
TELPISGASE AVLQRNVERW KAQMQVPADA PKH