Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4200 |
Symbol | |
ID | 1042442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4745185 |
End bp | 4746006 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147599 |
Product | hypothetical protein |
Protein accession | NP_746317 |
Protein GI | 26990892 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTGC GCGGAACGGG CAGGGTGCTG GCATGTGTGG CGCTGTTGGT GTCACCACTG GCCATGGCCG CAGGCAAGTG CGAGCGCCTG GTGGCGACCG GTAGCCCAGA TGCGCCGCCC TATTCGTGGC AAGACCCGAA AGACCCCGGG CACCTGATTG GCGCCAACGT CGACCTGTTG CGCCAGGTGG CTGGCGAACT GGGTGTGAAG GTCGAGGTGC TGAGTGCCGG TCGCCGTGAT CAGGCGCTGG AAGAGGTGCG CAGTGGGCGC ATGGACCTGC TGCTCGACAC CCCCTTGCAG GTGGAGCAAC TGACCGCGCT GGACTACATC CATCCGCCGT TGCAGCTCAA TGAGTACCTG GTGTGGACCC GCCATGATGC AGCGGTGACC TTTGATGGCC CGGCCGATCT GGCCAGATAC CAGGGCAGTT TGTCCGAGCG TGCACGCCTG ACCCCGGCCT TTACTGCGTT CGCCAAGGCC CAGCTCAAGC TGGTGCCGGC GCAAAACCTG ACCCAGGCCT TTCAGAAACT GGTACTCGGC CAGGTGGACT ATGTGCTGGC TGGCCGTTAC TCCGGTATGG CCATGGCCCA GAGCCTCGGC ATGAGCAATG ACCTCATAGC CCGCGGCTTG CCGGTGGACA GGCCGGGCCT GTACCTGGCG CTGTCGCACA ACTCGGCGTG TAATGACAGC TGGTTGCGTG GGCAATTGGC AAAAAAACTG ACAGAATTGC CGATCTCTGG TGCATCCGAA GCTGTGCTGC AACGAAATGT CGAGCGCTGG AAAGCGCAGA TGCAGGTACC GGCGGACGCC CCCAAACACT AG
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Protein sequence | MTLRGTGRVL ACVALLVSPL AMAAGKCERL VATGSPDAPP YSWQDPKDPG HLIGANVDLL RQVAGELGVK VEVLSAGRRD QALEEVRSGR MDLLLDTPLQ VEQLTALDYI HPPLQLNEYL VWTRHDAAVT FDGPADLARY QGSLSERARL TPAFTAFAKA QLKLVPAQNL TQAFQKLVLG QVDYVLAGRY SGMAMAQSLG MSNDLIARGL PVDRPGLYLA LSHNSACNDS WLRGQLAKKL TELPISGASE AVLQRNVERW KAQMQVPADA PKH
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