Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4178 |
Symbol | |
ID | 1042374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4720869 |
End bp | 4721594 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147577 |
Product | dienelactone hydrolase |
Protein accession | NP_746295 |
Protein GI | 26990870 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.119095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG TAATCGTCGA ATCGCTGGTT TATCACCTGT CTGGCAAGAC CTACGAAAGC CGTTTGGTCT ATGAGCCGGG TGCGCTGGGC CGCCCAGGGC TGGTGATGGC GCCGAACTGG ATGGGCATTG GTGAAGGTGC CGAGCGCATT GCCAAGGAAG TGGCCGAGAA GGGCTATGTG GTGCTGATCG CCGACCTGTA CGGGCAATCG GTGCGCCCGT CCAATGCCGA TGAGGCAGGC GTGGCGATGA TGCCGCTGAA GAATGACCGT GGCGAACTGC GCAAGCGCAT GCAGGAGGCC TTGGCGCAAT TGCTGGGGCA GTCGAAGGCG TTGCTGGAGC CTGGCAAGGT GGCCACCTTC GGCTTCTGCT TCGGTGGCTG CTGTGCCTTG GAACTGGCCC GTAGCGGCGC CGACCTGCGT GCGGCCGTGT CGTTCCACGG CACCCTGGAC ACGCCGAATC CTGAAGATGC CAAGCGCATC AAGGGCTCGG TGCTGGTGTT GCATGGTGCC TCCGATCCAT TGGTGCCTAA AGAGCAGCTG CCGGCATTCG AAGACGAGAT GAACGCGGCC AAGGTGGACT GGCAGTTGCT CAGTTACGGC GGCGCGGTGC ACTCGTTTAC CGACCCGAAT GCCAATATGC CGGGCAAGAT GCAGTATGAC CGGCGCACTT CCGAGCGAGC GTTTCGTTCG ATGCATAATC TGCTGAGTGA AGTGTTCCAG CGTTGA
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Protein sequence | MSKVIVESLV YHLSGKTYES RLVYEPGALG RPGLVMAPNW MGIGEGAERI AKEVAEKGYV VLIADLYGQS VRPSNADEAG VAMMPLKNDR GELRKRMQEA LAQLLGQSKA LLEPGKVATF GFCFGGCCAL ELARSGADLR AAVSFHGTLD TPNPEDAKRI KGSVLVLHGA SDPLVPKEQL PAFEDEMNAA KVDWQLLSYG GAVHSFTDPN ANMPGKMQYD RRTSERAFRS MHNLLSEVFQ R
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