Gene PP_4125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4125 
SymbolnuoH 
ID1042266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4663845 
End bp4664852 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID637147526 
ProductNADH dehydrogenase subunit H 
Protein accessionNP_746244 
Protein GI26990819 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGT TCACCCCCGA AGTGATCGAT GTGATCCTCA CCGTGCTGCG GGCCATCGTG 
GTCCTGCTGG CGGTGGTGGT CTGCGGTGCG CTGCTCAGCT TCGTCGAGCG CCGCCTGCTG
GGCTGGTGGC AGGACCGTTA CGGTCCGAAC CGCGTCGGCC CGTTCGGCAT GTTCCAGATC
GCTGCCGACA TGCTGAAGAT GTTCTTCAAG GAAGACTGGA ACCCACCCTT CGTCGATCGC
GTGATCTTCA CCCTGGCACC GGTAGTGGCC ATGAGCGCCC TGCTGATCGC CTTCGTGGTC
ATCCCGATCA CCCCGACCTG GGGCGTTGCC GACCTGAACA TCGGCCTGCT GTTCTTCTTC
GCCATGGCCG GCCTGTCGGT CTACGCGGTG CTGTTCGCCG GCTGGTCGTC GAACAACAAG
TACGCCCTGC TGGGCAGCTT GCGTGCTTCG GCACAGACCG TGTCGTACGA AGTGTTCCTG
GGCCTGGCGC TGATGGGCGT GGTGGTGCAG GTGGGTTCGT TCAACATGCG CGACATCGTT
GAGTACCAGG CGCAGAACCT GTGGTTCATC ATTCCGCAGT TCTTCGGCTT CTGCACCTTC
TTCATCGCTG GCGTCGCCGT GACTCACCGT CACCCGTTCG ACCAGCCGGA AGCAGAACAG
GAACTGGCCG ACGGCTACCA CATCGAGTAT GCCGGCATGA AGTGGGGCAT GTTCTTCGTC
GGTGAGTACA TCGGCATCAT CCTCATCTCG GCGCTGCTGG TAACCCTGTT CTTCGGCGGC
TGGCACGGCC CGTTCGGCAT CCTGCCGCAA CTGTCGTTCC TGTGGTTCGC CCTGAAGACC
GCGTTCTTCA TCATGCTGTT CATCCTGCTG CGCGCCTCGA TCCCGCGCCC ACGCTATGAC
CAGGTGATGG ACTTCAGCTG GAAGTTCTGC CTGCCGCTGA CCCTGATCAA TTTGCTGGTG
ACCGCTGCGA TCGTGCTCTA CAACACGCCA GCCGTCGCGG CCCAGTGA
 
Protein sequence
MSWFTPEVID VILTVLRAIV VLLAVVVCGA LLSFVERRLL GWWQDRYGPN RVGPFGMFQI 
AADMLKMFFK EDWNPPFVDR VIFTLAPVVA MSALLIAFVV IPITPTWGVA DLNIGLLFFF
AMAGLSVYAV LFAGWSSNNK YALLGSLRAS AQTVSYEVFL GLALMGVVVQ VGSFNMRDIV
EYQAQNLWFI IPQFFGFCTF FIAGVAVTHR HPFDQPEAEQ ELADGYHIEY AGMKWGMFFV
GEYIGIILIS ALLVTLFFGG WHGPFGILPQ LSFLWFALKT AFFIMLFILL RASIPRPRYD
QVMDFSWKFC LPLTLINLLV TAAIVLYNTP AVAAQ